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SCNpilot_expt_1000_bf_scaffold_13270_curated_5

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: 3069..3203

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RS12_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 44.0
  • Bit_score: 91
  • Evalue 3.20e-16
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 44.0
  • Bit_score: 91
  • Evalue 1.00e-16
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 44.0
  • Bit_score: 91
  • Evalue 4.50e-16

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 135
GTGCTGATCCGCGGCGGCCGTGTGCGCGACCTTCCCGGCGTGCGCTATCACGTCCTTCGCGGCGTCCTCGATACGCAGGGCGTCAAGGATCGCAAGCAGAGCCGTTCGAAGTACGGCGCGAAGCGTCCGAAGTAA
PROTEIN sequence
Length: 45
VLIRGGRVRDLPGVRYHVLRGVLDTQGVKDRKQSRSKYGAKRPK*