ggKbase home page

SCNpilot_expt_1000_bf_scaffold_661_curated_1

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(27..422)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Novosphingobium sp. AP12 RepID=J3APE8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 109.0
  • Bit_score: 87
  • Evalue 8.00e-15
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:AKH41842.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 113.0
  • Bit_score: 178
  • Evalue 8.20e-42
transposase IS116/IS110/IS902 similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 127.0
  • Bit_score: 83
  • Evalue 6.20e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGCCACGGCACCTGCGCTACTGGGTCGGCCTCGACGCCGGCCACTTGGAGACTGCGGTCTGCCTCGTCGATGCCGAAGGAAACGTTTTCTTCGAGGCAATGACTGAGACCCGCGCTGCTCCGATAAGGGATATCCTTCGCCGGTTCGGCGTTGAGCCTGTCCAGTCTATTACGATCGAGGCCGGTGTCGGCACTCAGATGGTTCGGGATCTCCGTTCGTTCGGTTTTCCCGTTCAAGTCGCCGACGTTCGCAAATCAAGCAAATTCCTGGCGATCCGACGTCAAAAGACAGATGCGAATGATGCCAAAGGTCTCGCTGAGCTTGGCCGACTGGCGCAGTCCTTCGGTCCCTATAGCGCGACGATCTGGGTGAGAGGTCAGCGACTATCAGGATGA
PROTEIN sequence
Length: 132
MPRHLRYWVGLDAGHLETAVCLVDAEGNVFFEAMTETRAAPIRDILRRFGVEPVQSITIEAGVGTQMVRDLRSFGFPVQVADVRKSSKFLAIRRQKTDANDAKGLAELGRLAQSFGPYSATIWVRGQRLSG*