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scnpilot_p_inoc_scaffold_5237_curated_8

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(6450..7229)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 259.0
  • Bit_score: 345
  • Evalue 7.70e-92
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 258.0
  • Bit_score: 329
  • Evalue 1.30e-87
tRNA modification GTPase MnmE n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2F8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 259.0
  • Bit_score: 345
  • Evalue 5.50e-92

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
CGCGTGGAGGCGGTGCTCGATTTTGCAGATGAGGATGACGTTGCCGTCCTGCCTCCGGACTTTGTTGCCGAAATCAGCGAGCTTGCCGGGGAAATCGCAGAGGCCCTTGATGCGCCTCGGGCCGAGACGTTGCGGGAAGGGTTTCGCGTGGTTCTCGCCGGCCCGCCCAATGCTGGGAAGTCCACCCTTTTTAACGCTTTAGTCGAGAGCGAAGCGGCGATTACTTCACCTAGTGCTGGCACGACCCGTGACGTTCTTGTGTACCCGGTCGCGCTGGCGGGGCTTCCTTTCAGCTTCATCGATACGGCCGGTTTGCGAGAGGAGGGAGCGGGAGAGATCGAGGCGATTGGTATTGCTCGGGCTCAGGCAGAACTGGAGAAAGCGGATCTTGTTCTGTGGCTTGGGCCCGAAGGGGAGGGCCCAGGGGATGCGTGGGAGATCGAAACGCAGATCGATGTAAAAGGTCACCCGTCCAAGGATGGGCCTCGTCATCGCGTCTCCGGATTGACGGGTGAGGGGGTTGTGAGTCTGAAGCAGGATCTCGTTGCTGTCGCGCGTGAAGCAATGCCTCGGCCGGGACAGGCAGCCTTGAACTTGCGGCAACGGAATTTGCTTGGCGATGCTTTTGCGGCTCTCGGCAGTGCGGCAGGGGAGGACGATCCGCTGTTATTGGCGGAGCAGCTTCGATTGGCCCGCCTGTCTTTCGATCGACTGATTGGGCGTTCGGCCACGGAAGATATGCTGGATGCCCTGTTTGGACGATTCTGCATCGGCAAGTGA
PROTEIN sequence
Length: 260
RVEAVLDFADEDDVAVLPPDFVAEISELAGEIAEALDAPRAETLREGFRVVLAGPPNAGKSTLFNALVESEAAITSPSAGTTRDVLVYPVALAGLPFSFIDTAGLREEGAGEIEAIGIARAQAELEKADLVLWLGPEGEGPGDAWEIETQIDVKGHPSKDGPRHRVSGLTGEGVVSLKQDLVAVAREAMPRPGQAALNLRQRNLLGDAFAALGSAAGEDDPLLLAEQLRLARLSFDRLIGRSATEDMLDALFGRFCIGK*