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SCNpilot_expt_1000_bf_scaffold_7627_curated_8

Organism: scnpilot_dereplicated_Sphingomonadales_2

partial RP 14 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38 MC: 1
Location: comp(7001..7576)

Top 3 Functional Annotations

Value Algorithm Source
Exopolysaccharide biosynthesis protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZDU4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 175.0
  • Bit_score: 175
  • Evalue 4.20e-41
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EGD57219.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 175.0
  • Bit_score: 175
  • Evalue 5.90e-41
gumC; exopolysaccharide xanthan biosynthesis chain length determinant protein GumC similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 166.0
  • Bit_score: 133
  • Evalue 7.60e-29

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGTTCTCCTCGCGCGCGGTGCTCGAGAATCCGACTGTCCAGGCGTTGATGACGCGCCGGGCCGAGCTGGAAGGGCAGCTGGAGGTCGCGCGGGCGCGCTATCTTCCGGACCATCCGCAGGTCAAGCAGGGCGAGACCGAGCTCAAGGAGATCAGGCAGCAGCTCAACGGAGTCGCTGCGAGCGTGCGCAATTCGATCAGGTCGGACTATGCGGCGGCGGCCGCGGCCGAGCAGCGGCTGCGCGAGCAGGTCCGCAAGCTGAAAGGCGATACGCTGGCGGAGCAGGATCGCTCGGTCCGCTACAACACGCTCGCGCGCGAGGCGGACACCAACCGCTCCATCTATGAAGGCTTGCTCCAGCGTTACCGCGAGCTCAACGCGAGCGCCGGCGTCTCGTCCAGCAATCTTTCGGTGATCGATGTCGCGGACCCGCCGCTGGAGCCTGCTTCGCCGAGCCTGCCGCTCAACCTCGCCGTGGCGCTTGCGATCGGGATCCTGCTNNNNNNNNNNNCGACGATACGGTGCGCGTGCCCGACGATCTGGAAGACAAGCTCGGGCTGCCCCTGCTCGGCGTGA
PROTEIN sequence
Length: 192
VFSSRAVLENPTVQALMTRRAELEGQLEVARARYLPDHPQVKQGETELKEIRQQLNGVAASVRNSIRSDYAAAAAAEQRLREQVRKLKGDTLAEQDRSVRYNTLAREADTNRSIYEGLLQRYRELNASAGVSSSNLSVIDVADPPLEPASPSLPLNLAVALAIGILXXXXXTIRCACPTIWKTSSGCPCSA*