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SCNpilot_cont_300_bf_scaffold_612_curated_10

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 8908..10077

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BBA0 similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 389.0
  • Bit_score: 386
  • Evalue 3.20e-104
Uncharacterized protein {ECO:0000313|EMBL:GAD48586.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 366.0
  • Bit_score: 277
  • Evalue 2.30e-71
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 397.0
  • Bit_score: 210
  • Evalue 1.30e-51

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGCGAGCAATCAGGCAGAACATATCCTGTCGACGGCGGCGCGCCTCGCGCTCGATCACGGGCTGGGGGCGCTGACGATGCGCGCCGTGGCGTCCGCCGCCGGGGTGTCGTCATCAGCGATCGTCTATCATTTCCGGACGCGCGAGGGATTGCTCGTCGCGATCCTCGAATATCTCGCCGAATCGATCGCTGCCGGCCGCGACCGGCTGGCCGGCGCCTTCGACGACGAACAGCGCGCGGTCGCCGGCCCGGCGGCGGGGGTGGCGGCGATCCTGTGCCGCATGGTCGACGAACAGGGGCTCGCCAGCATCACCGTCTCCGAGATCGCCCGGCTGTTGCGCGGCACCGATATGGACCGGCCGGTACAGGCGGCGATGGCGGCCGCGAACCAGCGCGCCGCGCATTTCTGGCAGGCGTTGCCGTTGCTCGCGCAGGAAGACGCGCAAGCGCGCGAGATCTGGGCGGCGTTTGGGCAAGGGGTGCTCGCACTCGCGATGCTCGATCGCAGTGCGGTGGCACGCAACGCGCGCGTCATCCGGCTGACCGCGCGGCTGGCGGACCGTCTTGCGGCGCGCGAGGTCGTGGTGCTGCCGGCGAGCGAAGCCCCTCAGCCGCTCGCGGCATTGGTGCGCCCGGCCGGCAAGCAGCAGATCGTCGACGCGACGATCCGGCTGAGCGGGGAGGGCGGGATCGAGGCGCTCACTCACCGCAAGATCGCCGCCGCCGCCGGGCTGTCGGTCGCATCGACGACCTATTTCTATCCGACCAAGGAGGATATCATCGTCGACGCCGCTTATGACGTCCAGGCGCGTGCGATGAATGCGGTTATAAATCAAAGCGTTGCTCCACCGAGCTTCATGTCGCGTATCACGCTCGACGATCGGCAGGAGGAGCGTGCCGAAATGGCGACGCTGAGCGCCTTCATGGCCGCCGCGGTGCGCAACCCCGAGCTGCTGCCGCTGGCCGAGGTGTTGCGACGGACCCGCGGCATCGACGGCGCGCGCTGGCTCGCGGCGCGCGGCTATCACGCCACCGATCGACTGGACGGAATCGTCTGGGCGGCGGTCACTTCGTTCCTTGCGCAGCATGCATTATTGCTGCCGGCTGCCGAGCGTGTCGCATTTCTCGATGATTTTTCAGATGCTTGGCTCCGCCGGCTGTTCGGCTGA
PROTEIN sequence
Length: 390
MASNQAEHILSTAARLALDHGLGALTMRAVASAAGVSSSAIVYHFRTREGLLVAILEYLAESIAAGRDRLAGAFDDEQRAVAGPAAGVAAILCRMVDEQGLASITVSEIARLLRGTDMDRPVQAAMAAANQRAAHFWQALPLLAQEDAQAREIWAAFGQGVLALAMLDRSAVARNARVIRLTARLADRLAAREVVVLPASEAPQPLAALVRPAGKQQIVDATIRLSGEGGIEALTHRKIAAAAGLSVASTTYFYPTKEDIIVDAAYDVQARAMNAVINQSVAPPSFMSRITLDDRQEERAEMATLSAFMAAAVRNPELLPLAEVLRRTRGIDGARWLAARGYHATDRLDGIVWAAVTSFLAQHALLLPAAERVAFLDDFSDAWLRRLFG*