ggKbase home page

SCNpilot_cont_300_bf_scaffold_612_curated_22

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(21506..22081)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HML7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 192.0
  • Bit_score: 112
  • Evalue 4.40e-22
DNA repair protein RadC {ECO:0000313|EMBL:EQB17621.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 192.0
  • Bit_score: 112
  • Evalue 6.20e-22
radC; DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 181.0
  • Bit_score: 107
  • Evalue 5.80e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGGCCGCGCTTATCCGGCCGATCGCCGGGCATCAAAGCGAGCAAGTCGCAGCCGAACTGATCGCCACCTTCGGCGGCCTCCGCCAGATCCTCGGCGCCGACACCGCGTCGCTCCCGGACCAGCTTCGACCGAGCGTCCAGCACCTCCGCCAGACCGAGCAGCTGTTTTCCCAGCTGCTCCGCGAGCAGCTCCAGAATACGATGCTGCTCGACCAGCCGGCGCTGGTGGAGCGATACCTTACGCACGAAATGGGAAGCCTCTCGGTCGAGCAGATCCGGGTGATGTACCTGGATTCATCCTATCGGCTGATAAAGGATCAGGTCGTCGCGAGCGGCACGCGATGGAAGGTTCGCGTCGAAATCCATAAAATCCTTCGTAAGTGCATCCTGTTCGACGCGAGTGCGATCATCATCGCGCACAATCATCCGTCGAGCCGCTGGAAACCGACGCCGCACGATATCGAGAGCACGCGTATTCTTGCCGAGGCAAGCCGCCTGCTTTCGATCGAATTCGTCGATCATTGGATCGTCACCGAAAGTGGCGCGCTGAGCATGCGCGCCGCGGGCTTGTTATGA
PROTEIN sequence
Length: 192
VAALIRPIAGHQSEQVAAELIATFGGLRQILGADTASLPDQLRPSVQHLRQTEQLFSQLLREQLQNTMLLDQPALVERYLTHEMGSLSVEQIRVMYLDSSYRLIKDQVVASGTRWKVRVEIHKILRKCILFDASAIIIAHNHPSSRWKPTPHDIESTRILAEASRLLSIEFVDHWIVTESGALSMRAAGLL*