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SCNpilot_cont_300_bf_scaffold_680_curated_22

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(20020..22452)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbE n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037D4A75 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 815.0
  • Bit_score: 1339
  • Evalue 0.0
conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 805.0
  • Bit_score: 1301
  • Evalue 0.0
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 815.0
  • Bit_score: 1339
  • Evalue 0.0

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2433
ATGCTGAACCTGCGTGAATATCGCAACACGGCCGATCGGCTTGCCGACCATCTGCCCTGGGCGGCACTGGTCGCGCCCGGCGTCGTCCTCAACAAGGATGGGAGTTTCCAGCGCACGTTGCGGTTTCGGGGACCCGATCTCGAAAGCGCGACCGAAGCGGAACTCGTGTCGGCCTGCGCCCGCGCCAACAATGTGCTGAAGCGCTTCGGCTCGGGCTGGGCGCTGCATGTCGAAGCCGAACGCCGCGAGGCGATCGGCTACCCCGACGGCGCATTCCCCGATGCGGCGAGCTGGCTGGTCGATCAGGAGCGCCGCGCCGGTTTCGAAGCGGCGGGACAGCATTTCGAGAGTCGCTATTGTCTGACACTGACCTTTCTGCCGCCGGCCGATCAGGCCGACACGGCGGGGCGGATGCTCGTCGAGCGGACTTCGGAAGGTGAAGGGCGCGACTGGCATCAGGCGCTTGCGGCATTCGTCGCCGAAACCGATCGCGCGCTGGACCTGTTCGCCGGGTTCATGCCCGGGGTCGTCGCGCTCGACGATCGCGAGACGCTGACCTTTCTTCACGGCACGATCTCGCCCCGACGCCACGACGTCGCGGTCCCCGAGACGCCGATGTACCTCGACGGCCTGCTCGTCGACACCCCGCTCGTCGGCGGACTCGAGCCGATGCTGGGTAGCCAGCATCTACGCACGCTCACCGTGCTTGGTTTTCCGAACGTGAGCCGGCCGGGCATTCTCGACGCGCTCAACCATCAGGATTTCGGCTACCGCTGGGTCACCCGCTTTATCGCGCTCGACAAGACCGACGCCACCAGGGCGCTGACCCGGCTCCGGCGTCAGTGGTTCAGCAAGCGCAAATCGATCACCGCGCTGCTGCGCGAGGTCATGTACAATCAGCCGGTCCAGCTGCTCGATAGCGATGCCGACAACAAGATGGTGGATGCCGATCTCGCGCTCCAGGCGCTGGGCGGCGATCATGTCGCGTTCGGCTATCTCACCACGACCGTCACCGTCGCCGACACCGACCGGGCGCGGGTCGAGGACAAGGTTCGCAGCGTCGAACGGATCGTCAACGGGCTCGGGTTCACCTGCATTCGCGAGGGAATGAACGCGGTCGAAGCGTGGCTCGCGAGCCTGCCCGGCCAGATCTACGCCAATGTCCGCCAGCCGCTCGTCCATACGCTGAACCTTGCGCACCTCATGCCGCTATCCTCGGTGTGGGCAGGCCCCGCACGCGACGCGCATCTTGACGGCCCGCCGTTGCTCTATGCGCAGACCAGCGGCTCGACGCCGTATCGGCTGTCGGTCCATGTCGGCGACGTCGGCCACATGATGGTGGTTGGGCCGACCGGCGCGGGGAAGTCGGTGCTGCTGTCGCTGCTCGCGCTGCAATTTCGACGCTACGCTGGTGGACAGGTCTATGTCTTCGACAAAGGCTTCTCGGCGCGGGCCGCCGTGCTGGCGATGGGCGGCGCACATCACTCGCTTGGGCAAGGCGGTGAGGCCGGACAAGCTCTGGCCTTCCAGCCTCTGCGGGAGATCGACGATCCGCTCGAACGCGCGTGGGCAACCGAATGGATCGTCGCCTTGCTCGACGCCGAGAAGGTGGTGGTTACGCCTGAGGTCAAGGATGCGGTCTGGTCCGCGCTGACCAGCCTCGCGTCGGCACCAGCGCACGAACGGACGATGACCGGGTTGGCGTTGCTGCTCCAGTCCAACGCACTGCGCACCGCGATCCAGCCCTATACGCTCGATGGACCGCATGGCCGACTGCTCGACGCGGCGGAAAGCGGGTTACGGTTTTCCAACGTGCAGTGTTTCGAGACCGAGGCGCTGCTCGGGACGACGAGCGTCGTCGCCCCGGTGCTCACCTATCTGTTCCATCGGCTTGGCGAACGGTTCGATGGACGGCCGACGCTGCTCATCCTCGACGAAGCCTGGGTCTTCCTCGACCATCCGCTGTTCGCCGCGCGGATCCGCGAATGGCTGAAGACGCTGCGCAAGAAGAATGTCGCGGTGGTGTTTGCGACGCAAAGCCTCGCCGATGTCGCGGAGAGCAGCATCGCCCCGGCGATCATCGAGAGCTGTCCGCAACGCATATTGCTGTCCAACGATCGCGCGATCGAACCACAGTCGCGCGCGACCTACGAGCGATTCGGGCTCAACGACCGGCAAATCGAGCTGATCAGCCATGCGACGCCGAAGCGGCAATATTATCTGCAATCAGCACGCGGCAATCGCCTGTTCGAACTTGGGCTTGGCCCGATCGCCCTGGCGCTGTGCGGCGCGTCCGATCCGGCGAGCCAGAAGCGGATCGATGCGATCCTCGCCGAGCACGGCTCGGACAACTTTGCGGCCCATTTCTTCAGATCCAGTGACCTCGCCTGGGCGGCCGAGCTCCTTGGCAAATTTCCCGGTACCGCCAGCTGA
PROTEIN sequence
Length: 811
MLNLREYRNTADRLADHLPWAALVAPGVVLNKDGSFQRTLRFRGPDLESATEAELVSACARANNVLKRFGSGWALHVEAERREAIGYPDGAFPDAASWLVDQERRAGFEAAGQHFESRYCLTLTFLPPADQADTAGRMLVERTSEGEGRDWHQALAAFVAETDRALDLFAGFMPGVVALDDRETLTFLHGTISPRRHDVAVPETPMYLDGLLVDTPLVGGLEPMLGSQHLRTLTVLGFPNVSRPGILDALNHQDFGYRWVTRFIALDKTDATRALTRLRRQWFSKRKSITALLREVMYNQPVQLLDSDADNKMVDADLALQALGGDHVAFGYLTTTVTVADTDRARVEDKVRSVERIVNGLGFTCIREGMNAVEAWLASLPGQIYANVRQPLVHTLNLAHLMPLSSVWAGPARDAHLDGPPLLYAQTSGSTPYRLSVHVGDVGHMMVVGPTGAGKSVLLSLLALQFRRYAGGQVYVFDKGFSARAAVLAMGGAHHSLGQGGEAGQALAFQPLREIDDPLERAWATEWIVALLDAEKVVVTPEVKDAVWSALTSLASAPAHERTMTGLALLLQSNALRTAIQPYTLDGPHGRLLDAAESGLRFSNVQCFETEALLGTTSVVAPVLTYLFHRLGERFDGRPTLLILDEAWVFLDHPLFAARIREWLKTLRKKNVAVVFATQSLADVAESSIAPAIIESCPQRILLSNDRAIEPQSRATYERFGLNDRQIELISHATPKRQYYLQSARGNRLFELGLGPIALALCGASDPASQKRIDAILAEHGSDNFAAHFFRSSDLAWAAELLGKFPGTAS*