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SCNpilot_cont_300_bf_scaffold_762_curated_2

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 327..1268

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKM0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 229.0
  • Bit_score: 435
  • Evalue 6.30e-119
Polysaccharide deacetylase {ECO:0000313|EMBL:AJP74069.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 229.0
  • Bit_score: 438
  • Evalue 8.00e-120
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 229.0
  • Bit_score: 435
  • Evalue 2.00e-119

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCGCGAGGGAGAGAAGGATCCCGGGCTGTACGATTTCCGGCCGTATCGCGATCGCGCAAAGCTGGAATGGCCCGAGGGCAAGAGGGTCGCGGTGTGGGTGTCGCCCAATCTCGAATTTTACGAGATCGACCCGCCCGCCAATCCGCAACGCAAGAGCTGGCCCAGGCCGCATCCCGACGTGGTCGGCTATGGCCACCGCGATTATGCCAATCGCATCGGGCATTGGCGGATGGCCGAGGTGATGGAAAAACACGGCTTCAAGGGATCGGTGTCGCTGTCGGTCGCCTTGTGCCAGCATCACCCCGATGTCGTCGCCAATGCCAATGCGCTCGGCTGGGAATTCTTCAGCCACGGCATCTACAACACCCGCTACAGCTACGGGATGGACGAGGCGCAGGAACGCGCGATCATCGAGGATTCGATCCGCACGGTGCGCGACGCCACCGGCCAGACGATCAAGGGCTGGCTCGCGCCGGCGCTGACCCACACCCCGCGCACGCTCGATCTGATCGCTGACTATGGCATGACCTATACCTGCGATCTCTATCATGACGACCAGCCGGGGCCGGTCCATGTGAAGCAGGGCCGGCTGGTATCGATGCCGTACAGCATCGAGGTGAACGATCATTACGGCTTCTTCGTCTACAATATGAGCCCGCGCGACTATGCCGATACGCTGATCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCACCGCATCGGTCCGTTCGAGGCGGTGCTGCGCCACATCGCCGCCGATGGACGCGCGTGGATCACCCGTTCGGGCGATATCGCCGATCATTTCCTCGCGACCGGCTATGACGCCGCGGTCGCCGACGCAGCCCGTTACGCAAAGGCCGACGCATGACGCTCGATCCCGCCTATCTCACCTATCCCAGGCGTCGCGCGGGAATGGATCATGA
PROTEIN sequence
Length: 314
MREGEKDPGLYDFRPYRDRAKLEWPEGKRVAVWVSPNLEFYEIDPPANPQRKSWPRPHPDVVGYGHRDYANRIGHWRMAEVMEKHGFKGSVSLSVALCQHHPDVVANANALGWEFFSHGIYNTRYSYGMDEAQERAIIEDSIRTVRDATGQTIKGWLAPALTHTPRTLDLIADYGMTYTCDLYHDDQPGPVHVKQGRLVSMPYSIEVNDHYGFFVYNMSPRDYADTLIRXXXXXXXXXXXXXXRTASVRSRRCCATSPPMDARGSPVRAISPIISSRPAMTPRSPTQPVTQRPTHDARSRLSHLSQASRGNGS*