ggKbase home page

SCNpilot_cont_300_bf_scaffold_277_curated_58

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(46849..48375)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein secretin CpaC n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I8E9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 497.0
  • Bit_score: 648
  • Evalue 4.50e-183
Flp pilus assembly protein secretin CpaC {ECO:0000313|EMBL:EQB07955.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 497.0
  • Bit_score: 648
  • Evalue 6.30e-183
pilus assembly protein CpaC; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 491.0
  • Bit_score: 622
  • Evalue 1.10e-175

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGGGGTGCAGCGTGGGCAATAAGAAACTCGCACGCGCCGCGCGCGGCAGCCTTCTCGCGCTTTCGCTGATGCTGGCGGGCGTTCCGCTGGCCGGGCCGGCGGCGGCGCAGGAATCAGCGCTCCACGGCGGCACGCTGGAAGTGCCGCTCAACAAGAGCCAGGTGGTCACGGCCGACCGCCCGATCGCCAAGGCGCTGATCGGCGGCGACGAGAAGGGCGAGAAGCAGGTCGCCGATATCGTGCCGATCACCAATCGCTCGGTCTATGTCCTCGGCAAGAACATGGGCACCACCAGCCTGACGCTCTACGATGCGGCAGGCCGGGTGATCTCCGTGATCGACATCGCCGTCGGCCCGGACGTGATCGCGCTGGCCGACCAGTTCCACAAATTGCTGCCGGGCGAACCGATCGAGGCGAGCATCTCGAACGATTCTGTCGTCCTCACCGGCACGGTCAGCAGCGCGAGCGCGGCCGATCGCGCGGCGCAGCTCGCCAAGGCCTATGCCGGCGACAAGGTCATCAACCTGCTCAGCGTCGGCTCCAGCCAGCAGGTGATGGTCGAGGTGCGCTTTGCCGAGGTGAACCGCAGCGCCGGCAAGGATATCGGCGTCAGCGGCTTCCTCAATTCACGCGGCGGATCGTTCAACAGCGTGCTGGGCAAGGGCGCGCAGCTCGTCCCCGGCAAGGACGTGAGCATCACCACGCCGACCGCCGGCGGCGGGACCATCACCTCCACCGTGCCGGGCGCGCCGATCCAGCAATTGTCGTCGATCACCAATACGTTCGGCATCTTCAGCAACGTGTTCAAGCTGGGCGGGCTTTCGATCGACGCCACGCTGAACGCGCTGGAATCGCGCGGCCTTTCCAAGACGCTGGCGCAGCCGACGCTGATCGCGCTGTCCGGCGAGAAGGCCTCGTTCCTGGCCGGCGGGGAGTTCCCGGTGCCGGTGGTGCAGGGCGGCGGCGCGGGCACGGGCGGCACGCCGCCGATCACCGTGCAGTTCAAGCCGTTCGGCGTCAGCCTCGCCTTCACCCCCACGGTGCTGAGCGACAAGACGATCAGCCTTGTCGTCGAGCCGGAAGTGAGCCAGATCGATCCCTCCGCGTCGCTGACGCTGGGCAACATCACCATCCCCGGCATCCGCACGCGGCGCGCCAGCACCACGCTGGAGCTGCGCGACGGCGAGAGCTTCGCCATCGCCGGGCTGCTGCAGAAGGACTTCAAGACCACCGTCGACCAGATTCCGCTGCTCGGCTCGATCCCGATCCTGGGGGCGTTGTTCCGCTCGACCAGCTTCCAGAAGGACCAGACCGAACTGCTGATCGTCGTCACCCCGCATCTGGTGGCGCCGCTAAAGCCCGGCCAGGTGCGCCTGCCGACCGACGCGGTGAAGGATCCGAGCGAGGCGGAAACCTTCCTGCTCGGCCAGGCCTATCACCCGGAGCCGGCGGTAGCGCCGGGCAAGCCGGCCGCACCGGCGGCGGCGAAGAAGGTGCCGGGCAAGGAGGATGGCTATGTCTATTGA
PROTEIN sequence
Length: 509
MGCSVGNKKLARAARGSLLALSLMLAGVPLAGPAAAQESALHGGTLEVPLNKSQVVTADRPIAKALIGGDEKGEKQVADIVPITNRSVYVLGKNMGTTSLTLYDAAGRVISVIDIAVGPDVIALADQFHKLLPGEPIEASISNDSVVLTGTVSSASAADRAAQLAKAYAGDKVINLLSVGSSQQVMVEVRFAEVNRSAGKDIGVSGFLNSRGGSFNSVLGKGAQLVPGKDVSITTPTAGGGTITSTVPGAPIQQLSSITNTFGIFSNVFKLGGLSIDATLNALESRGLSKTLAQPTLIALSGEKASFLAGGEFPVPVVQGGGAGTGGTPPITVQFKPFGVSLAFTPTVLSDKTISLVVEPEVSQIDPSASLTLGNITIPGIRTRRASTTLELRDGESFAIAGLLQKDFKTTVDQIPLLGSIPILGALFRSTSFQKDQTELLIVVTPHLVAPLKPGQVRLPTDAVKDPSEAETFLLGQAYHPEPAVAPGKPAAPAAAKKVPGKEDGYVY*