ggKbase home page

SCNpilot_cont_300_bf_scaffold_101_curated_76

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(64847..66229)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000377E1B7 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 441.0
  • Bit_score: 806
  • Evalue 1.50e-230
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 458.0
  • Bit_score: 749
  • Evalue 7.00e-214
Outer membrane efflux protein {ECO:0000313|EMBL:ADB41972.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 458.0
  • Bit_score: 749
  • Evalue 3.10e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1383
ATGATACTCATACTTAAACACATTCGCTATCTGACTCTGCTGCTTCCCCTATCTATGTCAGCGCAGCCTGCTCCACCGAGCGTATCACCGATTCTGGAAAACTACATTCGGGAAGGTGTGGCTAACAATCTGGGACTTCGGCAGGAATCGCTGGAGATCAGCCGTGTCACCGAGTCTTTGCATCAGGCTCGTTCTCTCTTTTATCCGCGTGTTGCGTTCAATCCTACTTATTCGCTGGCAGCTGGTGGCCGACGGCTGGAGTTTCCGGTAGGGGATCTGCTTAATCCGGCGTATAAAACGCTGAACCAGATTATAGGCGCTGATCGATTCCCGACCAATATTGAGAATGTCAATCAGTTATTGGCTCCCAATAATTTCCACGATACCAAGCTCACGATCAGCTACGCGATTTTCAACACGGATATTCAGTACAACTACCTCATTCAGAAACAACTGCTTTCAGCTCAGGAGGCTCGTAAGCGTGTGGTTGAGAATGAACTTCGATATAATATCGCTACGGCTTACTATCAGTACCTGCAAACGCTCGATGCTATTCGGATTTACGAGAACTCAAACAAAGTTCTGACTGAACTGGCCCGCCTGAATGAGAAACTGATTGCCAATAATGTAGCCACAAAAGAAGTGTTAACCTCAGCTCGCTACGAAATCAGTAAAGTCGATCAGCAACTAGCCGTAGCGCAAAAAAATCGCGAAACGGCCAAAGCCTATTTCAACTTCCTGCTGAACCGGGAGTTGAACGCGGTAATCGATGTCGATTCATCGCTTACAAAAATCCTGCCTGAGTCGAAGGAAAATTTGGCTGACTTACAACAAACGGCCCTCCGTGGTCGGCAAGAACTGATTCAATTGAATGGATCGCTGGATGCTGCCCGAACGGCGGTAAAGCTCAATGAGGCCAATGCTAAAATTCCGAATGTATATGTCGGTGGCAATACGGGCTTTCAGGGATTTGGCTACACCTTTCAGAATCAGGCGTATCTAGTGGCGCAGGTTGGCTTGCAATGGGATTTGTTTAAGGGCTACGAAAAACGCTCGAAGATTCAGCAGGCTAAAATTCAGACCGACGCGCTACAAACTAAACTCGCCGAAGTGCAGCGACAAATCCAGTTGCAGGTCTTACAAGCCTATTACGACCTGAATGCGGCTACTGAAAGCCTGACAGCTACGCAAAGTGGTGTGCTCAATGCCGATCAGACGTTCCGGGTTATCGACAGTAAATACCGCAACGGCCAATCGCTATTGATTGAGTACATCCGCTACCAGAATGATCGCCAAACGGCCCAGCTACAACACTCGCTGGCTCGTATGGACGTCCTTGTCAAACGCGCTGCCCTCGACCGGGCGGTAGCCGTCAGTAATTGA
PROTEIN sequence
Length: 461
MILILKHIRYLTLLLPLSMSAQPAPPSVSPILENYIREGVANNLGLRQESLEISRVTESLHQARSLFYPRVAFNPTYSLAAGGRRLEFPVGDLLNPAYKTLNQIIGADRFPTNIENVNQLLAPNNFHDTKLTISYAIFNTDIQYNYLIQKQLLSAQEARKRVVENELRYNIATAYYQYLQTLDAIRIYENSNKVLTELARLNEKLIANNVATKEVLTSARYEISKVDQQLAVAQKNRETAKAYFNFLLNRELNAVIDVDSSLTKILPESKENLADLQQTALRGRQELIQLNGSLDAARTAVKLNEANAKIPNVYVGGNTGFQGFGYTFQNQAYLVAQVGLQWDLFKGYEKRSKIQQAKIQTDALQTKLAEVQRQIQLQVLQAYYDLNAATESLTATQSGVLNADQTFRVIDSKYRNGQSLLIEYIRYQNDRQTAQLQHSLARMDVLVKRAALDRAVAVSN*