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SCNpilot_cont_300_bf_scaffold_255_curated_20

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(29017..30465)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E5307 similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 482.0
  • Bit_score: 933
  • Evalue 1.10e-268
RNA polymerase sigma54 factor {ECO:0000313|EMBL:AKD54595.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 482.0
  • Bit_score: 873
  • Evalue 1.20e-250
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 483.0
  • Bit_score: 864
  • Evalue 1.60e-248

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1449
ATGCAGAAGTTAAGCCTATCCCAATCACTTCAGCAAAAGCTATCTCCGCAGCAGATACAATTTATCAAGCTGCTGCAGATACCAACCGCTGAATTAGACACCAGAATTGAAGAAGAACTGGAAATTAATCCAGCCCTGGAAGAGGGTATGGATGAAGAATATGAGCAAAAAGAGGAAGACGATCCGTACGATGAGGTAGACGAATACAAAGACCGTGACGACGATCTGGATATCGATAGTTACATTAAAGACGAAGACTATACGGGCTACAAAATGCAGGGCGACGGTAACTATGCCGAAGAAGAACGCGAAATGCCGCTAGCCACCAGCTCTAGCCTGACCGATGCACTACTCCAGCAATTTGGCTACCTCAACCTGACCGAACAACAGCGAATTGTTGGTCTTCAGCTCATTGGCAGTATCGAAGCCGATGGATATATCCGTCGATCATTGCAGGCAATTGTCAACGATCTGGCCTTTGGGCAGAACGTATTTACCTCTACCGAAGAGGTCGAAGCTATTCTGCATAAAATTCAGTCATTCGATCCCCCTGGCATTGGCGCCCGTACCTTACAGGAGTGCCTGATCCTGCAACTTCGCCGGAAAGACCCGGCCGATCCGTACAACGTACTGGCCATCCGTATCATCGAGGATTTCTTCGATGAATTCTCCAAAAAGCATTACGACAAAATCCAGCGACGACTTAATATTAGCGATGATTCGCTCAAAAAAGTCATTGATATCATCATCAAGCTTAACCCCAAGCCCGGCTCAGTCGAAGATGAAGCCGGAGCCGCCCAGTACCTGGTCCCTGACTTTATTCTGACCAATAACAACGGAAAGCTCGAACTGACGCTGAATTCTAAAAACGCCCCTGAGCTACGGATCAGCCGATCGTTTGCTGATATGCTTGATACCTACGACAAGAGCAAAAAACAGAACAAATCCCTCAAAGAAACGGTCACGTTCGTAAAGCAGAAGCTGGATGCAGCCAAATGGTTTATCGACGCCATCAAACAGCGCCAGCAAACCCTGCTCAAAACGATGAATGCTATTGTTCGTTTCCAGTACGACTTTTTCCTGACAGGCGACGAATCGCGGCTTAAACCCATGATCCTGAAAGATATTGCGACGCTGATCGACATGGACGTTTCGACCGTTTCGCGGGTTGCCAATAGCAAAGCCGTACAGACTGAGTTCGGGATTTATCCACTCAAATATTTCTTCTCAGAAGGTATTTCGACCGATACGGGCGAGGACGTCAGTAGCCGGGAAGTAAAGAATATTTTAAAAGACCTGATCGATGCCGAACCTAAGCTTCATCCCTTATCGGACGATAAACTGGAAAAGATACTCAATGACCGGGGCTACAACATAGCCCGGCGTACCGTTGCCAAATACCGCGAGCAACTCAATATTCCGGTCGCCCGGTTACGAAAACAGCTATAA
PROTEIN sequence
Length: 483
MQKLSLSQSLQQKLSPQQIQFIKLLQIPTAELDTRIEEELEINPALEEGMDEEYEQKEEDDPYDEVDEYKDRDDDLDIDSYIKDEDYTGYKMQGDGNYAEEEREMPLATSSSLTDALLQQFGYLNLTEQQRIVGLQLIGSIEADGYIRRSLQAIVNDLAFGQNVFTSTEEVEAILHKIQSFDPPGIGARTLQECLILQLRRKDPADPYNVLAIRIIEDFFDEFSKKHYDKIQRRLNISDDSLKKVIDIIIKLNPKPGSVEDEAGAAQYLVPDFILTNNNGKLELTLNSKNAPELRISRSFADMLDTYDKSKKQNKSLKETVTFVKQKLDAAKWFIDAIKQRQQTLLKTMNAIVRFQYDFFLTGDESRLKPMILKDIATLIDMDVSTVSRVANSKAVQTEFGIYPLKYFFSEGISTDTGEDVSSREVKNILKDLIDAEPKLHPLSDDKLEKILNDRGYNIARRTVAKYREQLNIPVARLRKQL*