ggKbase home page

SCNpilot_cont_300_bf_scaffold_184_curated_29

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 34654..35001

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037088B1 similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 109.0
  • Bit_score: 208
  • Evalue 2.70e-51
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 109.0
  • Bit_score: 193
  • Evalue 4.90e-47
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADB36996.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 109.0
  • Bit_score: 193
  • Evalue 2.20e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 348
ATGAAACGAAGCTACTTAGGTGAGTTTGAAGAGATCGTTCTATTAACGGTTGCCGTACTGGAACTACAAGGACAAGCCTACGGAGTGGCCATTACGCACGAGATCATTGAGCAAACTGGTCGCTCGGTACGGCTCAATCAAATCCACGCGGCCCTCGACCGACTTGAGGAAAAAGGCATGGTGAAGTCGGAAATGGGCGAACCTACTGCCGAACGGGGTGGACGCCGGAAACGGCTCTTTACCGTAACGGCCTACGGTCGGCGAACCTTGCAGGAAATTCAGGAAGTCCGGGTTAGTTTCTGGAGTCGATTGCTGAATCCATTAAACCTAACCATCATTGGAGGCTAA
PROTEIN sequence
Length: 116
MKRSYLGEFEEIVLLTVAVLELQGQAYGVAITHEIIEQTGRSVRLNQIHAALDRLEEKGMVKSEMGEPTAERGGRRKRLFTVTAYGRRTLQEIQEVRVSFWSRLLNPLNLTIIGG*