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SCNpilot_cont_300_bf_scaffold_85_curated_4

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 5352..5870

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000372B16D similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 150.0
  • Bit_score: 137
  • Evalue 1.20e-29
WGS project CAIT00000000 data, contig 6 {ECO:0000313|EMBL:CCH53100.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 153.0
  • Bit_score: 134
  • Evalue 1.80e-28
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 148.0
  • Bit_score: 130
  • Evalue 5.80e-28

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 519
ATGAAACGATTCGAAACACCTGACAAACGCCACCATACCGACTTAGTTGCTTCTCTTTACAGGCAATATGCCAATAAGGTATTCCAGCAATGCATATCCATAACCAGGGATAATGAATTGTCCAGAGATATTACGCAGGATGTATTCCTCAAAGTATTTACTAAACTTGACTCATTCAATCATCAGGCTCATTTCTCTACCTGGCTCTATACCATCACCTTTAACCAGTGCATGAATCACTTACGAGAACAAAAGCGGTTCAAGATGACCCAACTCTCTCAGGAACTAATCGAAACCCTGGTGGATACAACCAACTGGATTGACAACGCAACCGATTTATTTGAACAGGCCCTATTGAGTCTGCACGCTGACGAAGCCAATCTGCTACGCTTGAAGTACCAGAAAGGGTTATCGATTCTCCAGCTCAGTCAGCAATACCGCCTAACACCCAATGCCGTAAAGATGCGCCTGCTACGAGGGCGGCAGAAGGTGATCATCTATATCAAAAGCCTAAATTAG
PROTEIN sequence
Length: 173
MKRFETPDKRHHTDLVASLYRQYANKVFQQCISITRDNELSRDITQDVFLKVFTKLDSFNHQAHFSTWLYTITFNQCMNHLREQKRFKMTQLSQELIETLVDTTNWIDNATDLFEQALLSLHADEANLLRLKYQKGLSILQLSQQYRLTPNAVKMRLLRGRQKVIIYIKSLN*