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SCNpilot_cont_300_bf_scaffold_406_curated_12

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(13403..14824)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-binding protein SusD n=1 Tax=Spirosoma luteum RepID=UPI0003640F87 similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 472.0
  • Bit_score: 460
  • Evalue 1.60e-126
RagB/SusD domain protein {ECO:0000313|EMBL:CCH54393.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 474.0
  • Bit_score: 452
  • Evalue 8.10e-124
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 487.0
  • Bit_score: 416
  • Evalue 1.40e-113

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1422
ATGAAACGATTTTCATCTAGTTTACTTCTCCTACTCGCACTGGCCTCCTCGGCTTGCCAGGACGACTTTCTGGCCCTATCGCCGATTTCGTCGGCCAACATCGATAAATTCTACCAGACCCCGGCCGATTTTCAGACGGCTATTCTAGGCGCTTATTCGACCTTACAGACGGGCGGCATGTACGGAAACTGGTTTTTGTTTGCCGAAGAACGCTCCGACAACACTGAACAGGAAGACTATGCGGGCACCACACAGGTGTATGGCGATTTTGATACGTTTACCCTGCTGTCGACCAACAGTTTTATCTCCGATGCCTGGAATGCCCATTATCGGTTGATCAATCAGTGCAATACCGTGCTGAGCCGGATACCGTCGGTGAATTTTTCGGACGCTACCCAGAAAGACCAGTTGATCGGCGAAGCTAAATTTTTGCGAGCACTGGCTTATTTCAATCTGGTACGGGTGTATGGCGATGTTCCGCTGGTGACAACGGCCATTAGCGGAGCCGATGCCTATCAGGTCAATCGGAGTCCAGTGGCGGATGTGTATACCCAAATTGGAAGCGACCTGACCGATGCCAGCGCAAAACTGCCCGCAAGTTACACCGGAGCCAACGTGGGCAGAGCCACCAAAGGGGCTGCGACAACGTTGCTGGGAAAAGTGTATCTGACTCAAAAGCAATATGATAAGGCCGCCCAGACGCTGAAAACGGTGATCGATGCCGGTACGTACAGTTTACTGCCTGCCTACGCGAGTGTGTTTCTGGATGCCAACGCGCAGAATAAAGAGTCGGTTTTTGAAGTAGCCTATAAAGCCAGCAGTCAGGGCGAAGGCAGTATCTATGCCACTACTTTTTCGCCGAAACGGGGCGCTGTTTATGTCACAGGTCAGGGAAATGGGCAGGGTTACAACCGACCGACGCAGAACATGATTGCCGCCTACGAGCTGGGTGATTTGCGCAAACCTGTGTCGTTGAGTGAAACCTGGACCGATGGCAAGCAGGTCTACAATGATCCCTACGTGAAAAAGCAATTCATTACCCCCTTGGCGACGGCTTATGATGGCGATGGCAACTGGATTGTGCTGCGCTATGCGGATGTACTGCTCATGTATGCCGAAGCCCTGAACGAACAAGGACAAACCAGTCAGGCGCTGCCGTATCTCAATCAGATTCGATCTCGGGCCGGGCTTGCAGACCGCACGGGTCTGTCGCAGGCAGATGCCCGGCTCGCGCTGGAACAGGAACGTCGCGTTGAGTTAGCCTTTGAAGGACATCGCTGGTTCGACCTGGTCCGAACAGGCCGCGCCCTGACGGTGATGAAAGCGACGGGTAAAACCGTTTCGGAGCGGGATCTGCTGTTCCCGCTTCCCCAGCAGCAGATTGACATTAACCCGCTTTTAAAGCAAAACACGGGGTATTAA
PROTEIN sequence
Length: 474
MKRFSSSLLLLLALASSACQDDFLALSPISSANIDKFYQTPADFQTAILGAYSTLQTGGMYGNWFLFAEERSDNTEQEDYAGTTQVYGDFDTFTLLSTNSFISDAWNAHYRLINQCNTVLSRIPSVNFSDATQKDQLIGEAKFLRALAYFNLVRVYGDVPLVTTAISGADAYQVNRSPVADVYTQIGSDLTDASAKLPASYTGANVGRATKGAATTLLGKVYLTQKQYDKAAQTLKTVIDAGTYSLLPAYASVFLDANAQNKESVFEVAYKASSQGEGSIYATTFSPKRGAVYVTGQGNGQGYNRPTQNMIAAYELGDLRKPVSLSETWTDGKQVYNDPYVKKQFITPLATAYDGDGNWIVLRYADVLLMYAEALNEQGQTSQALPYLNQIRSRAGLADRTGLSQADARLALEQERRVELAFEGHRWFDLVRTGRALTVMKATGKTVSERDLLFPLPQQQIDINPLLKQNTGY*