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SCNpilot_cont_300_bf_scaffold_406_curated_24

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 33618..36767

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003629C96 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 999.99
  • Bit_score: 2051
  • Evalue 0.0
Membrane protein {ECO:0000313|EMBL:AKD54260.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 999.99
  • Bit_score: 1806
  • Evalue 0.0
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 999.99
  • Bit_score: 1795
  • Evalue 0.0

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3150
ATGCGGAAAATTCTATTGGGAAGCTGGTTGCTTTCGTTGTTGTTCTGTTTGCCCCTTATGGCACAGGACATTACCGTGAGCGGCCGCGTCACTTCATCAGATGACGGTTCCACCTTACCCGGCGTGAGCGTTCAGGTAAAGGGAACAACTAAAGGTACTACTACCGACGCCAACGGACGTTACCAAATCAGTGTACCGGCTTCAGCCCGGCTTATTTTCAGTTTCATTGGCTATACCAGTCAGGATCTGGCTGTTGGCAATCAAACCACACTCAATGTTGCTCTGGTAGCTGGCTCCCAGTCGCTCGACGAGATCGTTGTAACGGCTCAAGGGATCGAACGCGACAAGCGATCGCTGGGATACGCAACCCAGGAAGTAGGTGGTAATATTCTGGCACAACGCTCAGAACCAAACCTGCTCAACGCCCTTCAGGGTAAAGTCTCCGGCGTACAGATCAACACCCAGAGTGGTGCTCCTGGCGCATCGACCAACATCAACATTCGGGGGATTACGTCGTTCAACGGATCAAACCAACCGTTGATCGTGGTGGATGGTATCATCTTCAGTAATGATGTCAACAACACCCAGAATACGCTGTTTGGCTCGCAACCATCGAACCGTCTGGCCGATGTTAACCCCGAAAGTATCGAATCGGTTAACATTCTGAAAGGGCCAGCTGCTGCCGTATTATACGGTTCGCGTGCATCGGCCGGTGCTATTGTGATCACCACAAAGTCGGGTCGTAACAACAACAACAAAACGGAAGTAACGGTAAATTCGTCGTACAACGTTCAGAACGTATACGGTATCCCTAAATTCCAGAACGACTACGGGCAGGGCGCCAATAACCTATTCAACTCGACATCAACCAACTCCTGGGGCCCTCCTTTTGCCGGAGGACCAACGTCAGTAACGAACACCCAGGGCAATACAGTGCCGTATCAGGCATATCCCAACAACGTAAAAGACTTTTATCGTCAGGGAATGATTCTGCAGAATTCGGTCAATATTGCTTCGGGTGATGCGAACCGGAACTACATTTTGGCGATTGGCAACACGCTACAGAATGGGGTTGTCCAGAATTCGAAGTTTAACCGAACCAACGTTCAGTTAGGTGGTGAAACAAGATTACAGAACGGCTTACGCATCAGTGCACAGGGTAACTATGTACAGACTGTTTCGGTAGGTATTCCAGGCGGTAATGGAGCCAGTGCTTTCGGGCAGATTACGCGTATACCACGCAGTTATGACCTGGCCAATGAGAGCTATCAGGATGCCAACGGCAAAAGCGTTTACTTTACGCCAAGCACCAACAACCCGCAGTGGAGCGTAAACAACGAACGACTGGACGGACAGGTAGACCGTTTCTTCGGTAACTTCCAGGTTGGATACGACATTACCAAATGGTTGAACGTAGCGTACCGGGTTACGGGTGATACCTACGCTGACCGCCGGAAACTGACGCTGCCTATTGGCGCTGGACGTTCTCCGCTGGGTGAAATACAACAGGACAATTTCTTCCGTAGTGAACTTAATGGTGACCTGCTTATTTCGGCTCGTAAAGACAATCTGTTTATCGAAGGCTTGAATGCAAACTTATTGCTGGGTAACAATATTAACCAGCGTAAATCGCAGGAGCTTTATACCGATGCCGCTTCGCTGACGATTCCAGGTTTCTATAACGTGAGCAATGGTACTGTATTTACAGGAAGTGGTGAAACAAGTACCCTCCGTCGATTAGTCGGGTATTATGGTCAGTTGTCGTTAAATTACAACAACTACCTCTTCGTGGAACTGTCGGGCCGGGCCGACCAATCATCGACGCTGCCCCAAGCCAACAATACCTACTTCTATCCATCGGCAGCCGTCAGTTTTGTTCCGACCGATGCCTTCAAGCTTAACTCGGACATCCTTTCGTATGCAAAAGTACGAGCCAGCCTTGCCCGGGTAGGACGTGATGCAGATCCTTACCTGCTTAACTCGGTCTATGTTTCTCAATCGTATGGTAACAACGTAGCTAGTATCACATTCCCGCTGTCAATTGCAGGGGCCAACATTCCGGGTTTCGGGGTTAGCTCACGTATCGGCAATAACAACCTGACACCTGAGTTTGTAACGTCCTGGGAAGTTGGTGCCAATCTGGGCTTCTTCAAGAACCGACTCAGCATTGATGCTACCTACTTCGAATCGCGCAGTACAGACCAGATTTTTAACGTAGCCATATCGAACTCAACGGGCTATAGCACCCGAACAACCAACGTTGGGGAATTGCTGAACAAGGGGGTTGAACTAGTTGTCAATGCAACGCCTGTTCGTGTAAGCGGTTTCAAATGGGATCTTACGCTGAACTATACGCTGATTCGGAATAAAGTAGTTTCGATTGCTCCAGGTGTGAAATCAGCCAATATTACAGGTAACTCGTTTACGGGTATTGCGCCGTCTATCTACGAAGGATATCCCTATGGAGTTATTGTTGGCACGGCCAATGCTCGTGTGCAAAATACTGATCCGACCGCACAATATTATGATGCAACCGGCCAGTATGCAGGTCAGTATGTCGTGAATGGCACAACAGGTGCCTTTGCTCCGGGTATTCCGAACTCAGTTATTTCAACACCACAGCCTAATTATACAGCTGGTCTGACCAACACCTTCTCGTATAAAGGCATTTCGTTGTCTGTGTTGATCGATACACGCCAGGGTGGGCAGATTTACTCATTCCCAATGGTTGACTATAAGAATACTGGCGCCCTGTACGTAACCGGTATCGACCGCGATCAACCCCGTATTCTACCGGGTGTTATTCAGAATGCAGATGGAACCTTCCGGCCTAACAACATCCAGGTACCTGCTCAAACCTATTGGGGCAACGTAGGAGGTCTGGCTTCCGAAGCGGCTGTATTCGATGCCACGGTTTATCGCCTGCGTGAAATCGCCCTGAACTATACGATACCGAAAAGCTGGATTAGCAAAACGCCATTCGGTTCAATCTCGGTAGGTGTTAGCGGACGAAATCTGTACTTCTATGCGCCCAGTTTCCCAGCTGATCCAGAAATCAACACCCAGGGAGCTGGTAACATCCAGGGGCTTGACCTGAACGGTCCGCCAAATACCCGCAACTTCGGCGGCAACATTCGGCTCACGTTCTAA
PROTEIN sequence
Length: 1050
MRKILLGSWLLSLLFCLPLMAQDITVSGRVTSSDDGSTLPGVSVQVKGTTKGTTTDANGRYQISVPASARLIFSFIGYTSQDLAVGNQTTLNVALVAGSQSLDEIVVTAQGIERDKRSLGYATQEVGGNILAQRSEPNLLNALQGKVSGVQINTQSGAPGASTNINIRGITSFNGSNQPLIVVDGIIFSNDVNNTQNTLFGSQPSNRLADVNPESIESVNILKGPAAAVLYGSRASAGAIVITTKSGRNNNNKTEVTVNSSYNVQNVYGIPKFQNDYGQGANNLFNSTSTNSWGPPFAGGPTSVTNTQGNTVPYQAYPNNVKDFYRQGMILQNSVNIASGDANRNYILAIGNTLQNGVVQNSKFNRTNVQLGGETRLQNGLRISAQGNYVQTVSVGIPGGNGASAFGQITRIPRSYDLANESYQDANGKSVYFTPSTNNPQWSVNNERLDGQVDRFFGNFQVGYDITKWLNVAYRVTGDTYADRRKLTLPIGAGRSPLGEIQQDNFFRSELNGDLLISARKDNLFIEGLNANLLLGNNINQRKSQELYTDAASLTIPGFYNVSNGTVFTGSGETSTLRRLVGYYGQLSLNYNNYLFVELSGRADQSSTLPQANNTYFYPSAAVSFVPTDAFKLNSDILSYAKVRASLARVGRDADPYLLNSVYVSQSYGNNVASITFPLSIAGANIPGFGVSSRIGNNNLTPEFVTSWEVGANLGFFKNRLSIDATYFESRSTDQIFNVAISNSTGYSTRTTNVGELLNKGVELVVNATPVRVSGFKWDLTLNYTLIRNKVVSIAPGVKSANITGNSFTGIAPSIYEGYPYGVIVGTANARVQNTDPTAQYYDATGQYAGQYVVNGTTGAFAPGIPNSVISTPQPNYTAGLTNTFSYKGISLSVLIDTRQGGQIYSFPMVDYKNTGALYVTGIDRDQPRILPGVIQNADGTFRPNNIQVPAQTYWGNVGGLASEAAVFDATVYRLREIALNYTIPKSWISKTPFGSISVGVSGRNLYFYAPSFPADPEINTQGAGNIQGLDLNGPPNTRNFGGNIRLTF*