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SCNpilot_cont_300_bf_scaffold_2354_curated_8

Organism: scnpilot_dereplicated_Stenotrophomonas_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 4296..9002

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 999.99
  • Bit_score: 2414
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CCH11358.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenot similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 999.99
  • Bit_score: 2414
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F12B similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 999.99
  • Bit_score: 2419
  • Evalue 0.0

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4707
ATGACGTCCTATTCGTACACCGAAAAAAAGCGCATCCGCAAGGATTTCGGCAAGCAGCGCTCGATCCTCGAGGTGCCGTTCCTGCTGGCCATCCAGGTCGACTCCTACCGCGAGTTCCTGCAGGAGAACACTGACCCGGCCAAGCGCTCCGACCACGGCCTGCACGCCGCGCTGAAGTCGGTGTTCCCGATCTCCAGCTACAGCGGCAACGCCGCCCTGGAGTACGTGGGCTACAAGCTGGGCGAGCCGGTGTTCGACGAGCGCGAGTGCCGCCAGCGTGGCATGAGCTACGGCGCCCCGCTGCGCGTGACCGTGCGCCTGGTCATCTACGACAAGGAATCGTCCACCAAGGCGATCAAGTACGTGAAGGAGCAGGAGGTCTACCTCGGCGAAATCCCGCTGATGACCGACAACGGCACCTTCATCGTCAACGGTACCGAGCGCGTCATCGTTTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGACCACGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTACAGCGCCCGCATCATTCCTTACCGCGGCTCCTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGTATCGACCGCCGCCGCAAGCTGCCGGTGTCGATCCTGCTGCGCGCGCTCGGCTACAACAACGAAGAAATGCTCAACGAGTTCTTCGACATCAACACCTTCCACATCCTGCCGGAAGGCGAGGGCGTGCAGCTGGAGCTGGTGGCCGAACGCCTGCGTGGCGAGACCCTGGGCTTCGACCTGGCCGATGGCGACAAGGTCATCGTGGAAGCCGGCAAGCGCATCACCGCGCGCCACGTCAAGCAGCTGCAGGCCTCGGGCATCGCCGCGCTGGCCGTGCCGGACGACTACCTGGTGGGCCGCATCCTGTCGCATGACGTGGTCGACGCCAACACCGGCGAACTGCTGGCCCAGGCCAACGACGAGATCACCGAAGAGCAGCTGCAGAACTTCCGCAAGGCCGGCGTGGATGCGGTCGGCACCCTGTGGGTGAACGACCTGGACCGTGGCCCGTACCTGTCCAACACCCTGCGCATCGACCCGACCAAGACCCAGCTCGAGGCCCTGGTCGAGATCTACCGCATGATGCGCCCGGGCGAGCCGCCGACCAAGGACGCCGCGCAGAACCTGTTCCACAACCTGTTCTTCACCTTCGAGCGCTACGACCTGTCCACGGTCGGCCGCATGAAGTTCAACCGCCGTGTCGGCCGCAAGGAAGTCACCGGCGAAGCCGTGCTGTACGACAGCAAGTACTTCGGCGAGCGCAACGACGAAGAGTCCAAGCGCCTGGTCTCCACCCATGGCGACGGGTCCGACATCCTGGACGTGATCAAGGTCCTGACCGAGATCCGCAACGGCCGTGGCGTGGTGGACGACATCGACCACCTGGGCAACCGCCGCGTGCGTTCGGTCGGCGAAATGGCCGAGAACGTGTTCCGCGTGGGCCTGGTCCGCGTCGAGCGCGCGGTCAAGGAGCGCCTGTCGATGGCCGAGTCCGAGGGCCTGACCCCGCAGGAGCTGATCAACGCCAAGCCGGTCGCCGCTGCCATCAAGGAATTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACGCACAAGCGCCGCGTCTCGGCACTGGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAAACCCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCCGTGTTCGCCCGCACCAACCAGTACGGTTTCCTCGAGACCCCGTACCGCAAGGTCGTGGACGGCAAGGTCACCGACGACGTCGAGTACCTGTCGGCGATCGAGGAGAACGAGTACGTCATCGCCCAGGCCAACGCCCTGACCGACGCCAAGAACATGCTCACCGAGCAGTTCGTGCCGTGCCGCTACCAGGGCGAGTCGCTGCTGAAGCCGCCGGCGGAAGTGCACTTCATGGACGTCTCGCCGATGCAGACCGTGTCGGTCGCCGCGGCGCTGGTGCCGTTCCTGGAGCACGACGACGCCAACCGCGCACTGATGGGCGCGAACATGCAGCGCCAGGCCGTTCCGACCCTGCGTGCGCAGAAGCCGCTGGTAGGCACCGGCATCGAGCGCGCGGTGGCGCGTGACTCGGGCGTGACCGTGAACGCCCGTCGTGGCGGCGATATCGTGCAGATCGACGCCGGCCGCATCGTGGTCAAGGTCAACGAGAACGAGATCACCGACGCGTCCGACGCCGGCGTCGACATCTACAACCTGATCAAGTACACCCGCTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGACGTGATCGCCCGCGGCGACGTGCTGGCCGACGGCCCGTCGACCGACATCGGCGAGCTGGCCCTGGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCCATCCTGCTCTCCGAGCGCGTGGTGGAAGAGGATCGCTACACCACGATCCACATCGAAGAGCTGACCTGCGTCGCGCGCGACACCAAGCTGGGGCCGGAGGAAATCTCGGCCGACATCCCGAACGTCTCCGAGCAGGCGCTGAACCGCCTGGACGAGAGCGGCGTGGTGTACATCGGTGCGGAAGTCCGCGCCGGCGACATCCTGGTGGGCAAGGTCACGCCGAAGGGCGAGAGCCAGCTGACCCCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCTTCCGACGTTAAGGACAGCTCGCTGCGCGTGCCGCCGGGCATGGACGGCACCGTCATCGACGTGCAGGTCTTCACCCGCGACGGCATCGAGAAGGACAAGCGCGCGCGCCAGATCGAAGAGAACGAGATCAAGCGCGTCAAGAAGGACTTCGACGACCAGTTCCGCATCCTGGAAGCGGCGATCTACGCGCGCCTGCGCTCGCAGATCGTGGGCAAGGTGGCCAACGGCGGTGCCGGCCTGAAGAAGGGCGACACCATCACCGACGCCTTCCTGGATGGCCTGAAGAAGGCCGACTGGTTCACCCTGCGCATGAAGGACGAGGACGCCTCCGAGGCGATCGAGCGCGCCCAGAAGCAGATCCAGGCGCACGAGAAGGAGTTCGAGCGCCGCTTCGCCGACAAGCGCGGCAAGATCACCCAGGGCGACGATCTGGCCCCGGGCGTGCTGAAGATGGTCAAGGTGTTCCTGGCGGTGAAGCGCCGCATCCAGCCGGGCGACAAGATGGCAGGTCGCCACGGCAACAAGGGCGTGGTCTCCAACGTGGTGCCGGTCGAGGACATGCCGTACATGGCCGACGGCACCTCGGTGGACATCTGTCTGAACCCGCTGGGCGTGCCGTCGCGCATGAACATCGGCCAGATCCTCGAAGTGCACCTGGGCTGGGCCGCCAAGGGCCTGGGCCGGCGCATCCAGAAGATGCTGGAGCAGCAGCGTGCGGTGAACGAGCTGCGCGAGTTCCTCGGCAAGATCTACAACCACGACAGCAAGCTGGCCGGTGATCGCGTCGACCTGTCGCAGTTCAGCGACGAGGAACTGGTGGCGCTGGCCCGCAACCTGACCGACGGCGTGCCGATGGCCACCCCGGTGTTCGACGGTGCGCACGAGGACGAGATCCGCGAGATGCTGAACCTGGCATACCCGGACGGCGACAAGGACACCGAGCAGCTGGGCTTCAACGCCAGCAAGACGCAGATGCAGCTGTACGACGGCCGCACCGGCGAGGCGTTCGACCGCAAGACCACCGTCGGCTACATGCACTACCTGAAGCTGAACCACCTGGTCGACGACAAGATGCACGCCCGTTCGACCGGTCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGTCGCGCATGAACATCGGCCAGATCCTCGAAGTGCACCTGGGCTGGGCCGCCAAGGGCCTGGGCCGGCGCATCCAGAAGATGCTGGAGCAGCAGCGTGCGGTGAACGAGCTGCGCGAGTTCCTCGGCAAGATCTACAACCACGACAGCAAGCTGGCCGGTGATCGCGTCGACCTGTCGCAGTTCAGCGACGAGGAACTGGTGGCGCTGGCCCGCAACCTGACCGACGGCGTGCCGATGGCCACCCCGGTGTTCGACGGTGCGCACGAGGACGAGATCCGCGAGATGCTGAACCTGGCATACCCGGACGGCGACAAGGACACCGAGCAGCTGGGCTTCAACGCCAGCAAGACGCAGATGCAGCTGTACGACGGCCGCACCGGCGAGGCGTTCGACCGCAAGACCACCGTCGGCTACATGCACTACCTGAAGCTGAACCACCTGGTCGACGACAAGATGCACGCCCGTTCGACCGGTCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAGATGGAAGTCTGGGCGCTGGAAGCCTACGGCGCGGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGCCGCAACCAGATGTACAAGAACATCGTCGACGGCGAGCACGAGATGGTCGCGGGCATGCCGGAATCCTTCAACGTGCTGGTGAAGGAAATCCGCTCCCTGGCCATCAACATGGAACTGGAAGACAACTGA
PROTEIN sequence
Length: 1569
MTSYSYTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENTDPAKRSDHGLHAALKSVFPISSYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDKESSTKAIKYVKEQEVYLGEIPLMTDNGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYNNEEMLNEFFDINTFHILPEGEGVQLELVAERLRGETLGFDLADGDKVIVEAGKRITARHVKQLQASGIAALAVPDDYLVGRILSHDVVDANTGELLAQANDEITEEQLQNFRKAGVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSTVGRMKFNRRVGRKEVTGEAVLYDSKYFGERNDEESKRLVSTHGDGSDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVFARTNQYGFLETPYRKVVDGKVTDDVEYLSAIEENEYVIAQANALTDAKNMLTEQFVPCRYQGESLLKPPAEVHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERAVARDSGVTVNARRGGDIVQIDAGRIVVKVNENEITDASDAGVDIYNLIKYTRSNQNTCINQRPLVKVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVVYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDKRARQIEENEIKRVKKDFDDQFRILEAAIYARLRSQIVGKVANGGAGLKKGDTITDAFLDGLKKADWFTLRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITQGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMADGTSVDICLNPLGVPSRMNIGQILEVHLGWAAKGLGRRIQKMLEQQRAVNELREFLGKIYNHDSKLAGDRVDLSQFSDEELVALARNLTDGVPMATPVFDGAHEDEIREMLNLAYPDGDKDTEQLGFNASKTQMQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKSRMNIGQILEVHLGWAAKGLGRRIQKMLEQQRAVNELREFLGKIYNHDSKLAGDRVDLSQFSDEELVALARNLTDGVPMATPVFDGAHEDEIREMLNLAYPDGDKDTEQLGFNASKTQMQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINMELEDN*