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SCNpilot_expt_300_bf_scaffold_339_curated_25

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(25213..26307)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=12494399 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 365.0
  • Bit_score: 701
  • Evalue 4.20e-199
RND family efflux transporter MFP subunit; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 359.0
  • Bit_score: 415
  • Evalue 2.50e-113
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 366.0
  • Bit_score: 641
  • Evalue 9.50e-181

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
ATGAAACGCTTTGCCCTGCTTGTTGTGCTGCCTCTGCTTGCCGCCTGCGGCGCCGATGGCAAATCCGCCACCGGCACGGACGGCCCGCCGGGCGGCATGCCGCCGCCGGAAGTGGTCGTCATGCCGGTGGGCAGCAAGACCTCCACGCTGACACAGGAACTCCCGGGCCGGGTGGAAGCCGTGCGTACGGCGCAGGTCCGTGCCCGCGTCGAAGGGATCGTCGAAAAACGCCTGTTCACGGAAGGCAGCGAGGTGCGCGCCGGCCAGCCACTGTTCCGGCTGGACGACCGCACCTACCGTACCGCCGCGCAGGCGGCGGAAGCCGACGTGGAAGCGAAGACACTCAATCTGACCCGCGTGGAGTCGCTCCTGCCCATCAAGGCGGTCAGCCAGCAGGAAGTGGATCTGGCCCGCGCCACGCTGAAGCAATCCCAGGCGCAACTCGCGCGTGCGCGTCTCGATCTGGAGAACACCACGGTGCCCGCCCCCATCTCCGGCCACATCGGCCGCACCGTGGTGACCGAGGGTGCGCTGGTCGGCCGGGACGATGCCACGCTGCTCGCCACCATCGAGCAGCTCGAACCGGTCAACGTGCTGTTCACCCAGCCCAACGCCGACGTACTGCGGCTGAAAAGCGCGCTCGCAGACGGCCAGTTGAAAGCGACAAACAGCCGCATCGTGGAACTCATCCTGGAAAACGGCCAGCCCTATTCCCACAAGGGCCGGCTCTTCTTCAGCGACCTGAGCGTGGATCCCGGCACCGGCGCCGTCACGCTGAAAGCGGAATTCCCCAATCCGCAGCGTCTGCTGCTCCCCGGCACCTTCGTGCGGGTACGGCTGCCCCAGGCCGTTGCGGAAAACGTGATCACCGTGCCGCAGCGTGCGGTGATGTCCGGGCCGCAGGGCCAGTTCGTTCTGCTGGTGGGGCCGGAAAACAAGGTCACGCCGCGGCCGGTGAAGCTTGGCGCCATGTCCGGAACCGATTTCGTCGTCGAAGACGGCCTCAAGAACGGCGAGACCCTGATCGTGGACGGCGTACAGAAAGCCCGGCCAGGCACGGTGGTGAAACCCGTCGTGTCGAAACAGGGCCACTGA
PROTEIN sequence
Length: 365
MKRFALLVVLPLLAACGADGKSATGTDGPPGGMPPPEVVVMPVGSKTSTLTQELPGRVEAVRTAQVRARVEGIVEKRLFTEGSEVRAGQPLFRLDDRTYRTAAQAAEADVEAKTLNLTRVESLLPIKAVSQQEVDLARATLKQSQAQLARARLDLENTTVPAPISGHIGRTVVTEGALVGRDDATLLATIEQLEPVNVLFTQPNADVLRLKSALADGQLKATNSRIVELILENGQPYSHKGRLFFSDLSVDPGTGAVTLKAEFPNPQRLLLPGTFVRVRLPQAVAENVITVPQRAVMSGPQGQFVLLVGPENKVTPRPVKLGAMSGTDFVVEDGLKNGETLIVDGVQKARPGTVVKPVVSKQGH*