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SCNpilot_expt_300_bf_scaffold_186_curated_13

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(11904..13028)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit id=12494786 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 375.0
  • Bit_score: 714
  • Evalue 6.50e-203
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 373.0
  • Bit_score: 378
  • Evalue 2.00e-102
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 375.0
  • Bit_score: 643
  • Evalue 1.50e-181

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGAAAAAAATGGGAATGCTGGCGCTGCTGGTCATGGTATTGGCCGCGGCGGCATGGTGGTGGAACGGCAACCGCAAGCCCGCCGAGCCGCAATACCGGACCGTGACGGCAGACCGTGGCGACATTGTGGCCGAAGTCTCGGCCAACGGCACGCTCAATCCGGTCACGCTGGTCAATGTCGGCACCCAGGTCTCGGGAACGGTCCGGCGCATCGAAGCCGACTTCAACCAGCAGGTGAAGGCGGGGCAGGTGCTGGCCGAACTCGATCCGGCATTGTTCAAGGCGGCGCTGGCACAAAGCACGGCCAACCTGGCCAATGCCCAGGCGCAGCTCGATCTTGCCGAGGCCAATGCGGTGCGCATGCAGACGCTGTTCAGGCAGGAATACGTGTCGCGCCAGGAACTCGACCAGACGACGGCCGCCCGCGCCCAGGCGGCGGCTCAGGTCAGGCTGGCGCGCGCCCAGGTCACGCGCGATCAGACCAATCTCGGTTTTTCGATCATCCGTTCGCCGGTCGACGGCACCGTGATCAACCGCCAGATCGACGTCGGCCAGACCGTGGCGGCAAGCTTCCAGACGCCGACCCTGTTCCAGATCGGCAAGGATCTGACGCAGATGCAGATCGACTCCACCGTATCGGAGGCCGACATCGGGCAGATCAAGGTCGGGCAGCCGGTCAAGTTCCGGGTCGATGCGTTTCCCGATACCGAATACAGCGGCGCGGTGCGGCAGGTCCGGCTGAACGCCACGACCCAGCAGAACGTCGTGACCTACAACGTGGTGGTGAATGTCGCCAACCCCGATCTCGCGCTGATGCCGGGCATGACGGCGAACCTGCAGGTGCTGGTCGACACCCGGCGGAACGTGCTGCGGGTGCCGACGACGGCGCTGCGTTTCCGCCCGCCGGCAGGCAGCACCGCCGAGGAGGGCGGCAAAATACGCGGCGCGGCGGTGTACCGGCTGGTCGACGGCAAGCCGGTGCGGGTGGCGGTCAAAATCGGCATCAGCGACAAGGCCTATACGCAAATCGTCGGCGGCAAGCTGGAACCGGGCGAGGCCGTGATCGTGGCCGACCTGGCGGCCAGGAAGGACAACGGCGGCATGCCGCGCGGACGCCTGTTCTGA
PROTEIN sequence
Length: 375
MKKMGMLALLVMVLAAAAWWWNGNRKPAEPQYRTVTADRGDIVAEVSANGTLNPVTLVNVGTQVSGTVRRIEADFNQQVKAGQVLAELDPALFKAALAQSTANLANAQAQLDLAEANAVRMQTLFRQEYVSRQELDQTTAARAQAAAQVRLARAQVTRDQTNLGFSIIRSPVDGTVINRQIDVGQTVAASFQTPTLFQIGKDLTQMQIDSTVSEADIGQIKVGQPVKFRVDAFPDTEYSGAVRQVRLNATTQQNVVTYNVVVNVANPDLALMPGMTANLQVLVDTRRNVLRVPTTALRFRPPAGSTAEEGGKIRGAAVYRLVDGKPVRVAVKIGISDKAYTQIVGGKLEPGEAVIVADLAARKDNGGMPRGRLF*