ggKbase home page

SCNpilot_expt_300_bf_scaffold_230_curated_16

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 11065..11676

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12496893 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 408
  • Evalue 5.40e-111
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 203.0
  • Bit_score: 300
  • Evalue 1.30e-78
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 203.0
  • Bit_score: 292
  • Evalue 1.00e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera linaloolentis → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGTCCCGCTATACCGGCCCCCGCCTCAAGATCATGCGCGCCCTGGGCACCCAGTTGCCCGGCCTGTCCACGAAATCCATCGAAGATCGACCCTATCCGCCCGGCCAGCACGGGCAGAAGACCAAGCGCAAGTCGGACTTCGGCGTGAAGCTGATGGAAAAACAGAAGCTGCGCTACAACTACGGCCTCAACGAAACGCAGATCCGCCGCCTGTTCGTCGAAGCCAAACGCGCGAAGATGCCCACCGGCGACAAACTGCTCGAACTGCTGGAATGCCGGCTCGACAACGCCGTGTTCCGTGCCGGTTTCGCCCCCACCGCGGTCGCGGCGCGCCAGCTCGTGCGCCATCGCCACATCCTGCTCAACGGCGTGCGCGTGAACATTCCGTCGATCCGCATCAAGCCCGGCGACACGCTGGCCCTGCACGGCCGCGCCGCGAACATCCCGATGGTGGCCGAGAGCCTGCAGGCGCCGGCGCTCACCCGGCCCGAGTGGCTGCATTTCGATGAAACGCAGCGCACCGCGCAGATCAATCGCGTGCCCATGGCCGACGAAGTGCCCTTCCCCATCGACGTGCAGCAGGTCGTCGAATATTACGCACAACGTCTCTAA
PROTEIN sequence
Length: 204
MSRYTGPRLKIMRALGTQLPGLSTKSIEDRPYPPGQHGQKTKRKSDFGVKLMEKQKLRYNYGLNETQIRRLFVEAKRAKMPTGDKLLELLECRLDNAVFRAGFAPTAVAARQLVRHRHILLNGVRVNIPSIRIKPGDTLALHGRAANIPMVAESLQAPALTRPEWLHFDETQRTAQINRVPMADEVPFPIDVQQVVEYYAQRL*