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SCNpilot_cont_300_bf_scaffold_79_curated_39

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(43920..45809)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036F8550 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 629.0
  • Bit_score: 1180
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25203.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 631.0
  • Bit_score: 1147
  • Evalue 0.0
putative TRAP dicarboxylate transporter DctM and DctQ subunit similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 631.0
  • Bit_score: 1146
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGGCGCATGAATCGACTTTCGAGGCGGCCGCCTTCGCCGGCGCCTCGGCCAACCCGCTGAGCGGCATGGCGTCGCGCATCGACCGTGTGCTTGGTGCAGCGGTCGAGGCCGTGGCCGCGCTGCTGGTGCTCGCCGAGATCTGTGTGCTGTTCGCCGGCGTGGTCTCGCGCTACCTGTTCCACGCGCCGCTGGTATGGTCCGACGAGCTCGCGTCCATCCTTTTCCTGTGGCTGTCGATGCTCGGCGCCGTGGTGGCGCTGCGGCGCGGCGAGCACATGCGCATGACCGCGCTGCTGCAGAAGGTGCGCCCGCCAACGCGCGCCATGCTCGATGCGTTCGCGATCGCGGCCTCGGTCGCGTTCCTGGTGCTGATCGTCTGGCCGTCGATCGACTACGCGCACGAAGAGTCCTTCATCGTCACGCCGGCGCTGGAGGTCAGCAACGCATGGCGCGCCGCGGCCATTCCGGCGGGCATCGGCATCATGCTGGTGATGGCACTGCTGCGCCTGTTGCGCGTGTGCACCGGCCGGCAGATCGCATTCGCACTCGTCGGCACGGCTGCGCTGGCGGGCGCCTTCTGGCTCGCCGCACCGGTATTCGCCACCCTCGGCAAGCTCAACCTGGTGATCTTCTTCGTGGTCATCGTGGCGGCCACCGTGCTCTCCGGCGTGCCCATTGCCTTCTCGTTCGCGCTGGCGACCTTCGGCTACCTGGCGCTCACCACGCGCACGCCGCTGCTGGTGATGGTGGGCCGCCTCGACGAGGGCATGTCGCACCTGATCCTGCTGGCGGTGCCTCTGTTCATCTTCCTGGGCGCGCTCATCGAGATGACCGGCATGGCGCGCGCCATGATCCAGTTCCTCGCCAGCCTGTTGGGTCATGTGCGCGGCGGCCTCTCGTACGTGCTGATCGGCGCGATGTACCTGGTGTCGGGCATCTCGGGCTCCAAGATCGCGGACATGGCGGCCATCGCGCCCGTGCTCTTCCCCGAGATGACCAAGCGTGGCGCCAAGCCCGGCGACCTGGTGGCGCTGCTGTCGGCCACCGGCGCGCAGACCGAGACCATTCCACCCTCGATCGTGCTGATCACGATCGGCTCGGTCACCGGTGTCTCGATCGCGGCGCTGTTCACGGGCGGCCTGCTGCCGGCGGTGGTGCTGGGCGCCGCGCTGTGCGCGGTGGTCTGGTGGCGCTACCGCCGCGAAGACCTCAGCGGCGTGCAGCGCTACAGCAAGCGCGAGATCGGCAAGCTGCTTCTGGTGGCGCTGCCCGCCGTGCTGCTGCCCTTCGTGATACGCGCCGCCGTGGTCGAGGGCGTGGCCACGGCCACCGAAGTGTCGACCATCGGCATCGTCTACGCGGCCGTCGTGGGCTTGGTGGTGTACCGCCAGTTCGACTGGAGGCGGCTCAAGCCGATGCTCGTCGACACGGCCTCGCTCTCGGGCGCGATCATCTTCATCGTCGGCTGCGCCACGGCCATGGCCTGGGGCCTCACGCAGTCGGGGTTTTCGCAGGACCTGGCGCGGGTCATGGGCACGCTGCCCGGCGGGGCCTATGGCTTCCTGGCCGTGTCGATCGTCGCCTTCATCGTGCTGGGCAGCGTGCTCGAGGGGATTCCGGCCATCGTGCTGTTCGGGCCGCTGCTGTTTCCCATCGCCAAGGCCGCCGGCGTGCACGAGGTGCACTACGCCATGGTCGTCATCTTCTCCATGGGCATCGGCCTGTTCGCGCCCCCCTTCGGCGTGGGCTACTACGGCGCGTGCGCCGTCAGCAAGGTCAACCCCGACGAGGGCATCCGGCACATCTGGGGCTACATCGGCGCGATGCTGGTCGGCCTGGTGATCGTGGCCCTGTTCCCGTGGTTCTCGATCGGCTTCCTGAAATTCTGA
PROTEIN sequence
Length: 630
MAHESTFEAAAFAGASANPLSGMASRIDRVLGAAVEAVAALLVLAEICVLFAGVVSRYLFHAPLVWSDELASILFLWLSMLGAVVALRRGEHMRMTALLQKVRPPTRAMLDAFAIAASVAFLVLIVWPSIDYAHEESFIVTPALEVSNAWRAAAIPAGIGIMLVMALLRLLRVCTGRQIAFALVGTAALAGAFWLAAPVFATLGKLNLVIFFVVIVAATVLSGVPIAFSFALATFGYLALTTRTPLLVMVGRLDEGMSHLILLAVPLFIFLGALIEMTGMARAMIQFLASLLGHVRGGLSYVLIGAMYLVSGISGSKIADMAAIAPVLFPEMTKRGAKPGDLVALLSATGAQTETIPPSIVLITIGSVTGVSIAALFTGGLLPAVVLGAALCAVVWWRYRREDLSGVQRYSKREIGKLLLVALPAVLLPFVIRAAVVEGVATATEVSTIGIVYAAVVGLVVYRQFDWRRLKPMLVDTASLSGAIIFIVGCATAMAWGLTQSGFSQDLARVMGTLPGGAYGFLAVSIVAFIVLGSVLEGIPAIVLFGPLLFPIAKAAGVHEVHYAMVVIFSMGIGLFAPPFGVGYYGACAVSKVNPDEGIRHIWGYIGAMLVGLVIVALFPWFSIGFLKF*