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SCNpilot_cont_300_bf_scaffold_79_curated_41

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 47036..48046

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcription regulator n=1 Tax=Variovorax paradoxus RepID=UPI000374D00C similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 336.0
  • Bit_score: 645
  • Evalue 2.50e-182
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25201.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 336.0
  • Bit_score: 644
  • Evalue 1.00e-181
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 336.0
  • Bit_score: 643
  • Evalue 4.00e-182

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGCTCGACATCGCCCGCGCGGCGAACGTGTCGACCGCCACCGTCGACCGCGTGCTCAACCGACGCCCCGGCGTGCGCGACGCGACGGTGCAGCGCGTGCTCAAGGCCGCGGGCGAACTCGATTACCTGCCCGGGCCTGAGCTCTATGCCGCGCTGACGCCGCCGCCGCTGCGGCTGGTGTTCCTGCTGCCGGCGGGCACCAACCGGTTCATCCGCATGCTGGGGGACATGGTGGGCTACGCGCAGGAGCACTGGGCGCCGTTCAACGTGCAGTGCCGCACCGTGTTCATCGAGAGCTTCAATCCGCATGAGCTGGCGAACGCGCTGCACCGGCACGGCCAGCGCTGCGACGGCATCGCGATGATGGCGCTCGAGCATCCGGCGGTGCGCGAGGCGGTGGCCGCGCTCGCCGCACGCGGGCTGCCGGTGGTGACGCTGATCTCGGACCTGTCGAACTCGGAGCGCGCCGCGTTCGTGGGGCTCGACAACCGGGCTGCCGGGCGCACGGCGGGCTACCTCATCGGCCGTTTCATCGGCGCGCGCGCCGCGAAGGTCGCGCTCATCGCGGGAAGCCTGAGCTACAAGGCGCACGAGGAACGCGAGGCGGGCTTCCTGCACGTCATCGACGAGATGTTCCCGCGGCTCGAAGTGGTGGGCCTGCGCGAAGGGCAGGACGACGCGGACAAGAACTACCGCCAGACGCGCGCGCTGCTGGAGCAGCACCCGGACATGGGCGGCATCTACAACATCGGCGGAGCGTCCGACGGTGTGGCGCGCGCCCTGAAGGAAGCGGGGCGAGCGCAGAAGGTGGTCTTCATCGGCCACGGCCTGACGCCCGATACGCGCGCCTTGCTCATCGACGGCAGCATGGACGCGGTGATCACGCAGAGCCCGCACACCACGCTGATGAGCTGCGTGCGCATCTTCACCAACCTGCGCGACAAGCGCGAGGCTCTGAGCGGCGTGGAAACGACGCGCAGCCAGGTGATTTTTCGCGAGAACCTTCCGTAG
PROTEIN sequence
Length: 337
VLDIARAANVSTATVDRVLNRRPGVRDATVQRVLKAAGELDYLPGPELYAALTPPPLRLVFLLPAGTNRFIRMLGDMVGYAQEHWAPFNVQCRTVFIESFNPHELANALHRHGQRCDGIAMMALEHPAVREAVAALAARGLPVVTLISDLSNSERAAFVGLDNRAAGRTAGYLIGRFIGARAAKVALIAGSLSYKAHEEREAGFLHVIDEMFPRLEVVGLREGQDDADKNYRQTRALLEQHPDMGGIYNIGGASDGVARALKEAGRAQKVVFIGHGLTPDTRALLIDGSMDAVITQSPHTTLMSCVRIFTNLRDKREALSGVETTRSQVIFRENLP*