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SCNpilot_cont_300_bf_scaffold_79_curated_49

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(54669..55730)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 353.0
  • Bit_score: 558
  • Evalue 1.80e-156
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAX0_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 353.0
  • Bit_score: 558
  • Evalue 5.60e-156
ABC transporter related protein {ECO:0000313|EMBL:ADU36324.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 353.0
  • Bit_score: 558
  • Evalue 7.80e-156

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGTCCAAACTCGAACTGAACAACGTCCGCAAGCAATACGGCGCGCTGGCCGTGGTCGACGACCTGAGCCTGCAGCTGAGGAAGGGCGAACTCGTCACGCTGCTGGGGCCCTCGGGCTGCGGCAAGACCACGACGCTGCGCATGATCGCGGGCTTCATCGAACTCAGCGGCGGCTCGATCGCCGTCGACGGCAGGCAGATCTCGGGCGCCGGGCGCACCGTGCCGCCGGAACACCGCGGCATGTCGATGATCTTCCAGAGCTATGCGATCTGGCCGAACATGACGGTGGCCGAGAACGTCGCGTTCGGTCTCAACGTGCGCCGTGTACCGGGCGAAGAAAGCAAGCGCCGCGTCGAGGAGATGCTGGATGTGGTGAAGCTCGGAGCACTCGCGCAGCGATATCCGGCGGAGCTCTCGGGTGGCCAGCAGCAGCGCGTGGCGCTGGCGCGCGCGATGGTGGTCCGGCCGGAAGTGCTTCTGCTCGACGAGCCTCTGTCGAACCTCGACGCGAATCTGCGCGAGGAGATGGCTGGCGAGATCCGCCGGCTGCACGACGAGTTCAATTTCACGACCGTCTATGTCACGCACGACCAGACGGAAGCGATGACGATCTCGGACCGCATCGCTGTGCTCAACCTCGGCAAGCTCGAACAGATCGACACGCCGTGGAACCTCTACAACCGTCCCCGCACGCGCTTCGTCGCGGGTTTCATCGGGCAGACCAACCTCGTCGAAGGCCACGTCCGCGACGGGCAGATCCGGCTGCGCGGGTTGGAGGGCGTGCTGCCGATGGGCGGTCAGGCGGCAGCCGCGTCGGCCGACATGCGCATCTCGATCCGCCCGCAATCGCTGTTCCTCGGACCGCAGGGCAACGGCGCATTGCCGATGGGGGCGGTGTCCGTCGTCGCCAGAACCTACCTGGGCGAGTACTGGGACTACCTCGTGCGTCCGACGGCTGGCGGCGACGAACTCAAGGTGCACGCCCCGCCGTCCAGCGTGCTCGATGTCGGACACGAATCGCTGCTGTCGATCGACCCGGCCGGCGTTGCGCTCGTGAGCTGA
PROTEIN sequence
Length: 354
MSKLELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSIAVDGRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEEMLDVVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEIRRLHDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIGQTNLVEGHVRDGQIRLRGLEGVLPMGGQAAAASADMRISIRPQSLFLGPQGNGALPMGAVSVVARTYLGEYWDYLVRPTAGGDELKVHAPPSSVLDVGHESLLSIDPAGVALVS*