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SCNpilot_cont_300_bf_scaffold_79_curated_54

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 60598..61335

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAW7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 253.0
  • Bit_score: 355
  • Evalue 5.00e-95
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31764.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 251.0
  • Bit_score: 359
  • Evalue 4.90e-96
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 253.0
  • Bit_score: 355
  • Evalue 1.60e-95

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGTCCCGTATCAACCTGAGCGACAAGATCCGCGAAGCCCTCGAAAGCGAAATCATCGCTGGCAAACTGGATGCCGGCTCGCGCATCGACGAGCAGGAACTGATGGACCGCTTCGAGGTGTCGCGCACCCCCGCGCGGGAGGCCATCCAGCAGCTGATATCGGCAGGCCTCGTGACCACCATGCCGCGACAGGGCGCAGTCGTTGCGACATTGTCGGTACCCGAGTACATCGCGATGCTCGAGATTCTCATGGAACTCGAAGGCTTGGCGGCGCGGCTGGCTGCGCGACGCATGCCTGCCCTGCAGCGGAGGCAACTGGAGCAGGCCAACGAAGCCTGCAAACAGGCCGCGGTCAAGGACGATGCGGAGGCCTACGGCGAAGCCAACCGCACATTCCACGAGATCATCTACGACGGCAGCCTGAACGAAGTGCTTGCGCGCCAGTTGCGATCGATGCGGCTACGGATGCGTCACCCGCAACGCGCGCTGTTCGACCGGCCCAACCGCATCCGCAACTCGCTCGCGGAGCATCAGACCATCATCAGTGCCATCCTGTCGGGCGATGAAGAAGCGGCGGACCGGGCCATGACCGCTCACATCTCGAGCGGCGGCAATGTGTATGCCGACGCCATCGCAAGCATGCCGCACGGCCGGCCTCCCCTGCCACCGCGTACGGAACCTGAAACCAAGGGGCCGGCGCGCAAGCCCGACAGGAAGCGCGCGACCGAAAAAGCCTAG
PROTEIN sequence
Length: 246
MSRINLSDKIREALESEIIAGKLDAGSRIDEQELMDRFEVSRTPAREAIQQLISAGLVTTMPRQGAVVATLSVPEYIAMLEILMELEGLAARLAARRMPALQRRQLEQANEACKQAAVKDDAEAYGEANRTFHEIIYDGSLNEVLARQLRSMRLRMRHPQRALFDRPNRIRNSLAEHQTIISAILSGDEEAADRAMTAHISSGGNVYADAIASMPHGRPPLPPRTEPETKGPARKPDRKRATEKA*