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SCNpilot_cont_300_bf_scaffold_79_curated_56

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(62210..63664)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CZ60_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 472.0
  • Bit_score: 699
  • Evalue 2.10e-198
drug resistance transporter, EmrB/QacA subfamily similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 472.0
  • Bit_score: 699
  • Evalue 6.70e-199
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ACS22217.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 472.0
  • Bit_score: 699
  • Evalue 3.00e-198

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGAATGAAGTGGTGAAGGAAGACGAGGAGAGGGCCGCGTGGACCGTGCTCGTCGTTGCAAGCCTGGGCGCGTTCCTGTGTTTCCTGAACCTCAGTGCGCTCAACGTAGCGCTTCCTTTGGTTGCGCGTAGCCTGAACGCTTCGCCATCGCAGGCGAGTTGGATCCTGCTGTCTTACATGCTGGTCAGCACCGTGTGCATCCTCAGCTTCGGAAGGCTGGCCGATCTGTGGGGGCGGCGGCGACTCTTTCTCGCGGGGCTGGGTCTCTTCCTGATCGCTTGTGCGGGCTGTGCGGCCGCGACGAGCTTTGGCGCCATGCTGTTCTTTCGCGTCTGCCAAGCAGTAGGCGCGGCTGGCGTCATGGCCAATTCCAGCGCCCTGGTGGGCGATGCCTTCGGCCGCAAGAAGGTGGGGCTGGCGCTCGGGGTGCTCGCCATGGTGGCTGCCCTCGCGCAGGTCGCGGGGCCGCTGGCCGGCGGCTTTGTCGTTTCTTGGTGGGGTTGGCGCGTCCTCTTCATGCTGAACGTGCCTATCGGGCTTTGCGTGCTGGCCTGGTCGTGGAAGACCCTGCCGGAGAGCACGGCGACAGCCATCACGGAGCGTTTCGACCTGGCCGGCGCCTTGATGTCGCTCGCCGGAATTGGAAGCGTGATCTATGCGCTCTCGATGGTGGGAACGCGCGGCTGGGCGAGCGTGCCGGTCTGGGTCTTCATGCTTGCCGGTGTTTGCGCCATCGTCGTTTTCGTTAGGGTGCAGCAGCGCGCGGCGAGCCCTCTGGTCGACCCGGCACTGTTCAGGGATCCAGGGCGTTGCACGGCTTACGCGTGTATCCTGCTTCTGTCGATGTCACAGGCCGCACCCTTGCTGCTCGTGGCCCTGTATCTCCAGGCGTGCGCGGGCCTGGCGCCATCGGAGGCGGGCACGCGCATTGCACCGGTCGCATTGGGGATGCTGATGGCAGCCCCGATGGCTGGCAGCCTCATGAGGCGCTTCACGCCCGAAGTCCTCTGCGTGGCAGGCATGCTGATCGCCGCGGGTGCGTTGGCGCTGTTGGCAGCCATGCTGCAGCCAGCCATCGGCACCGGACAATTGGCCGCCTGCCTGTGGATGCTGGGCCTGGGCATCGGTAGCTTTGTGACGCCGAACAACGCGTCCATCCTTCAAAGCGTGGTGCCACAGCGCAGAGGTATTGCGAACGGCGTGCGCGCGACCTTGCAGAACACCGGAATCATGATGGGGACGGCGCTCACGTTGAGCGTGGCGATGGCCCAATTGCCCTACAGCTCGCAACTCATGATTCTTGGTAACGGCAATTCAGCGCTCGCGGCTGTCGATATCGCTGCATTCACCGAGGGAGCAAGAGCTGCTTTCGCAATGCTCGCGTGCCTTTGCCTTATGGGGGCGGCGCTGATTGCGAAGAACTGCCGCACGGCCTGGGCGGGGCAACCTGTTTGA
PROTEIN sequence
Length: 485
MNEVVKEDEERAAWTVLVVASLGAFLCFLNLSALNVALPLVARSLNASPSQASWILLSYMLVSTVCILSFGRLADLWGRRRLFLAGLGLFLIACAGCAAATSFGAMLFFRVCQAVGAAGVMANSSALVGDAFGRKKVGLALGVLAMVAALAQVAGPLAGGFVVSWWGWRVLFMLNVPIGLCVLAWSWKTLPESTATAITERFDLAGALMSLAGIGSVIYALSMVGTRGWASVPVWVFMLAGVCAIVVFVRVQQRAASPLVDPALFRDPGRCTAYACILLLSMSQAAPLLLVALYLQACAGLAPSEAGTRIAPVALGMLMAAPMAGSLMRRFTPEVLCVAGMLIAAGALALLAAMLQPAIGTGQLAACLWMLGLGIGSFVTPNNASILQSVVPQRRGIANGVRATLQNTGIMMGTALTLSVAMAQLPYSSQLMILGNGNSALAAVDIAAFTEGARAAFAMLACLCLMGAALIAKNCRTAWAGQPV*