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SCNpilot_cont_300_bf_scaffold_72_curated_214

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 230171..230797

Top 3 Functional Annotations

Value Algorithm Source
YadA domain-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZ76_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 231.0
  • Bit_score: 165
  • Evalue 6.20e-38
yada domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 231.0
  • Bit_score: 165
  • Evalue 2.00e-38
YadA domain-containing protein {ECO:0000313|EMBL:ADU35493.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 231.0
  • Bit_score: 165
  • Evalue 8.70e-38

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGACTACACCCAAGCGCTCTTCCAAACGTTCGTCTTCCGGCACGCGCAGCACGGGCATCAGCCACCTGCTTGCCTCGGTATTGGTGGGGGCGGGATATGTAATGACGCTGCCAGTGGCGTACGCGCAGGCAGTGACGATCGGGGGCGACCCCATCCGGATCAATAACGGTGGCAACGCAACCAACACCGGTGGCCTGCTGAACGCGCCCCAGGGCGTGAGTACGACCTCCCTGACTGCCGGCAGCATCAGCGCGGGCACCATCACCGCCAACACCGGCACCATCAATACGCTCAGCGCGTCAAGCATCACGTCTGCCACCGTTTCCGCCGGCAGCGTCGACGTCACCGGCAACGTGACCGCGGCCGGCGCCAACATCGCGGCCCTGACGGCAGGCAGCGCCAACATCACCGGCACCGTGACGGCCAACGGTGTCCAGGCAACCAACGGAACCTTCACCGGCACCCTCGGCGCCAACGTGCTGACCGCCGCGACAGGCACGATCACCAGTCTCACGTCGACCAGCATCAGTACCGGCACGCTCACTGCCGGCACCATCAACGCGACGAACACCACGACGTCCAACCTGTCGGCGACCACGGGTACGGTCAACACGCTGAACGCCACC
PROTEIN sequence
Length: 209
MTTPKRSSKRSSSGTRSTGISHLLASVLVGAGYVMTLPVAYAQAVTIGGDPIRINNGGNATNTGGLLNAPQGVSTTSLTAGSISAGTITANTGTINTLSASSITSATVSAGSVDVTGNVTAAGANIAALTAGSANITGTVTANGVQATNGTFTGTLGANVLTAATGTITSLTSTSISTGTLTAGTINATNTTTSNLSATTGTVNTLNAT