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SCNpilot_cont_300_bf_scaffold_455_curated_1

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3..779

Top 3 Functional Annotations

Value Algorithm Source
Putative AP endonuclease, family 2 n=1 Tax=Variovorax paradoxus B4 RepID=T1XIS7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 228.0
  • Bit_score: 476
  • Evalue 2.00e-131
putative AP endonuclease, family 2 similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 228.0
  • Bit_score: 476
  • Evalue 6.40e-132
Putative AP endonuclease, family 2 {ECO:0000313|EMBL:AGU52468.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 228.0
  • Bit_score: 476
  • Evalue 2.90e-131

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
CCTCGGTATATCTGCTCTTTCTCATGTCCGTCATTCTCCAAGTTGACGGACTTCACTGCCATTACGCTGGTACGGCTGGAAGGGGGCAGGTCAAAGGCGTCGGCCAACCTGGGCCTCACGGCGCATGCGACCTTCTCGGGCGCACTGGCCTGGCCGTACCTCTATTCGTGGCCGCCGCGCCAGCCGGGACTCATCGAGGAAGCCTTCGACGAACTCGCGCGCCGCTGGCGGCCGATCCTCGACGCCTTCGACGCCGTGGGCGTGGACGTGGGCTACGAGATCCACCCCGGCGAAGACCTGCACGACGGCGTGAGCTACGAGATGTTCCTGGAGCGCGTGAACAACCACCCGCGCGCCTGCCTGCTGTACGACCCGAGCCACTTCATGCTGCAGCAGCTCGACTACCTGGCCTACATCGACCACTACCACGAGCGCATCAAGATCTTTCACGTGAAGGACGCCGAGTTCAACCCGACCGGCAAGCAGGGTGTGTACGGCGGCTTCCAGAGCTGGATCAACCGCGCCGGGCGCTTCCGTTCGCTGGGCGACGGGCAAGTGAACTTCAAGGCCATCTTCTCGAAGATGGCGCAGTACGACTTCCCCGGCTGGGCGGTGCTGGAGTGGGAGTGCTGCATCAAGCATCCGGAAGACGGCGCGCGCGAGGGCGCGAAGTTCATTGCCGACCACATCATCCGCGTGGCCGACCGTGCCTTCGACGACTTCGCGGCGGGCGGAGTCGACGTGGCAGCCAACCGGCGAATGCTCGGGCTCGGCTGA
PROTEIN sequence
Length: 259
PRYICSFSCPSFSKLTDFTAITLVRLEGGRSKASANLGLTAHATFSGALAWPYLYSWPPRQPGLIEEAFDELARRWRPILDAFDAVGVDVGYEIHPGEDLHDGVSYEMFLERVNNHPRACLLYDPSHFMLQQLDYLAYIDHYHERIKIFHVKDAEFNPTGKQGVYGGFQSWINRAGRFRSLGDGQVNFKAIFSKMAQYDFPGWAVLEWECCIKHPEDGAREGAKFIADHIIRVADRAFDDFAAGGVDVAANRRMLGLG*