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SCNpilot_cont_300_bf_scaffold_455_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14769..15704)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyproline epimerase (EC:5.1.1.8); K12658 4-hydroxyproline epimerase [EC:5.1.1.8] similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 311.0
  • Bit_score: 594
  • Evalue 2.00e-167
Proline racemase n=1 Tax=Variovorax sp. CF313 RepID=J2KHJ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 311.0
  • Bit_score: 596
  • Evalue 1.20e-167
Proline racemase {ECO:0000313|EMBL:EJL79665.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 311.0
  • Bit_score: 596
  • Evalue 1.80e-167

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCAGCGCATCCAGGTCATCGACTCTCACACGGGCGGCGAGCCCACGCGCCTGGTGACCGGGGGCTTCCCCGACCTGGGCAAGGGCAGCATGGCCGAGCGCCGCGCGCTGCTGGCCGAGCGGCACGACAAATGGCGCGCCGCCGCCGTGCTGGAGCCGCGCGGCAGCGACGTGGTGGTGGGCGCGCTGCTGTGCGAGCCCGTGTCGCCCGACGCCGCCGCCGGCGTGATCTTCTTCAACAACGCCGGCTACCTCGGCATGTGCGGCCACGGCACCATCGGGCTGGTCGCGAGCCTTGCGCACATGGGGCGCATCGGCGTGGGCGAGCACCGCATCGAGACGCCCGTGGGCACGGTCACCACCACGCTGCATGAAGACGGCTCGGTGAGCGTGCGCAACGTGCCGGCCTACCGGCACCTGCGGCAGGTGGCGGTCGAGTTGCCGGGCCATGGAACCGTGCGTGGAGACGTGGCCTGGGGCGGCAACTGGTTCTTCCTGGTGAGCGAACACGGCCAGCGCGTGGCCAGCGACAACCTCGCCGCGCTGACCGACTACACCGCCGCCTTGCGCCGCGCGCTGGCGGCGCAGGGCATCACAGGCGCCGACGGCGCCGAGATCGACCACATCGAACTCTTCGCCGACGACAGCGAAGGCGCCGACAGCCGCAACTTCGTGCTGTGCCCCGGCAACGCCTACGACCGCTCGCCCTGCGGCACCGGCACCAGCGCCAAGATCGCCTGCCTCGCGGCCGACGGCAAGCTCGCGCCGGGCGCGGTGTGGACGCAGGCCAGCGTGATCGGCAGCCGCTTCGAGGCCAGCTACGCGATGGACGGCGACAAGGTCATTCCCACGCTGCGCGGCCGCGCGCACATCAGCGCGGAAGCCACGCTGCTGATCGACGACGCCGATCCCTTCGGCTGGGGTATCCGGCTCTGA
PROTEIN sequence
Length: 312
MQRIQVIDSHTGGEPTRLVTGGFPDLGKGSMAERRALLAERHDKWRAAAVLEPRGSDVVVGALLCEPVSPDAAAGVIFFNNAGYLGMCGHGTIGLVASLAHMGRIGVGEHRIETPVGTVTTTLHEDGSVSVRNVPAYRHLRQVAVELPGHGTVRGDVAWGGNWFFLVSEHGQRVASDNLAALTDYTAALRRALAAQGITGADGAEIDHIELFADDSEGADSRNFVLCPGNAYDRSPCGTGTSAKIACLAADGKLAPGAVWTQASVIGSRFEASYAMDGDKVIPTLRGRAHISAEATLLIDDADPFGWGIRL*