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SCNpilot_cont_300_bf_scaffold_224_curated_13

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18076..19446)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system OmpA/MotB family protein n=1 Tax=Variovorax sp. CF313 RepID=J2KUG6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 470.0
  • Bit_score: 846
  • Evalue 1.30e-242
Type VI secretion system OmpA/MotB family protein {ECO:0000313|EMBL:EJL76648.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 470.0
  • Bit_score: 846
  • Evalue 1.90e-242
hypothetical protein; K11892 type VI secretion system protein ImpK similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 462.0
  • Bit_score: 824
  • Evalue 1.70e-236

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAACGGTGTGAACGACATGGCCGTCGGCGCGGGAGGCTTCGTGCCGCCGAATCCAGGAGGCGGCGCCGCTGCTGCTGACATGGGCGGCATGCCCGCCGCGCAGCGCGGAATGGGCGCGCAGCCCGAATCCTTCACCGCATGGCACGACGCACGGCGCCCGCATGCGGGTGACACAGCCCTCGCGGGCAACAACCCGCTGGTGGCGGCCGCAAATCCGCTGCTTGACCTGATTCCGCAGATCCGCGCGACCGGCCACCATCCCGCGCCCGCGCAATTGCGCGAGCACCTGGTCGACGAAGTGCGCCGCTTCGAGACGCGCGCGCAGCAGGCGGGCATTGCGCCCGAGGTGATCATCGGCGCGCGCTACTGCCTGTGCACCGCGGTGGACGAGGCCGCCGCGCTCACGCCGTGGGGCGGCAGCATCTGGTCGTCGCAGAGCCTTCTGGTGATGTTCCACAACGAGACCTGGGGCGGCGAGAAATTCTTCCAGCTGCTGTCGCGGCTGGTACAGAACCCGCAGCAGCACCTGCATCTGATCGAGCTCATCTACTTCTGCCTGGCGCTGGGCTTCGAGGGGCGTTTTCGCGTCATCGACAACGGACGCTCGCAGCTCGAGACGCTCAAGCAGCGGCTGCTGCAGATCATCCGGCAGACGCGCGGCGAAATCGCCGTGCCGCTGTCGCCGCACTGGCAGGACGCGAGCGCGCCGGTACGCCGCACGCGCAACTGGCTGCCGGTGTGGGCCGTGGGCGCGGTGGCGGCGGTGCTGCTTCTGGTGGCGTTCGCGCTGCTCACCTTCAACCTGGCGGGCACGTCCGATGGCGCCTTCGCGGCCGTCAACGCGGTGCGGTTGCCGCAGACCGCGCGCGCCGTGGTCATGCCCGCGCCGACACCGCGCCTGCAGCGTTTCCTGGAGCCCGAGATCCGTGACGGCCTGCTGACCGTGCGCGACGAGGCTGACCGCAGCGTGGTGGTACTGCGCGGCGACGGCCTGTTCGCATCCGGCTCCGACCGCGTGCTCGACCGCTATGCGCCGGTGCTCGCGCGCGTGGCCGACGCGCTGAACGCCGTCGAAGGCAATGTGCTGATCAGCGGCTTCAGCGACGACCAGCCGATCCGCAGCGTGCGCTTTCCTTCCAACTGGCAGCTCTCGCAGGCCCGCGCCGATGCGGTCAAGAAGATGATCGCCACGCGCCTCGCACGTCCCGAGCGCCTGCGCGCCGAAGGCCGCGGCGATGCCGACCCGCTGGTGCCCAACGACTCGCCGGCCAATCGCGCGCGCAACCGCCGCGTCGAGGTCACGCTGCTGGTGGCGCCGGTGGCGGGCGTGCCCGCGCCCGCGCCACAACCGCAGGGAGGAGCCCGCTGA
PROTEIN sequence
Length: 457
MNGVNDMAVGAGGFVPPNPGGGAAAADMGGMPAAQRGMGAQPESFTAWHDARRPHAGDTALAGNNPLVAAANPLLDLIPQIRATGHHPAPAQLREHLVDEVRRFETRAQQAGIAPEVIIGARYCLCTAVDEAAALTPWGGSIWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQHLHLIELIYFCLALGFEGRFRVIDNGRSQLETLKQRLLQIIRQTRGEIAVPLSPHWQDASAPVRRTRNWLPVWAVGAVAAVLLLVAFALLTFNLAGTSDGAFAAVNAVRLPQTARAVVMPAPTPRLQRFLEPEIRDGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYAPVLARVADALNAVEGNVLISGFSDDQPIRSVRFPSNWQLSQARADAVKKMIATRLARPERLRAEGRGDADPLVPNDSPANRARNRRVEVTLLVAPVAGVPAPAPQPQGGAR*