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SCNpilot_cont_300_bf_scaffold_224_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 22118..24004

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system FHA domain protein n=1 Tax=Variovorax sp. CF313 RepID=J2TED7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 659.0
  • Bit_score: 935
  • Evalue 2.30e-269
Type VI secretion system FHA domain protein {ECO:0000313|EMBL:EJL76652.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 659.0
  • Bit_score: 935
  • Evalue 3.20e-269
FHA domain containing protein; K07169 FHA domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 655.0
  • Bit_score: 834
  • Evalue 2.30e-239

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGCGTTGGACGGTGATCGAACATGCCGGCAAGCCGGTGGCCACGGGCCCCTCGGCGCTGCTGGCCGCACCCGGGGGAACCATCGGGCGCAGCCCCGACAACCACCTGGTGCTGCCCGACGAACAGCGACAGATATCGCGCCTGCAAGCCACCGTGCGTTTCGACGAAGACGGCGCGGCGGTGCTTCGCAACATGAGCGCGGTGCTGCCCATCAGCGTCAACGGACGCACGCTGGTGCATGAGCAGGAAGCGCGCGTGGCCGACGGCGACCGCGTGGAGATAGGCAGCTACGTGCTGGAGGCCGCGAGCGCATTGCGCGCCGCGCCAGCGGTGGTTGTCGCGCCACCACCGCCACAAGCACCACCGCTTCAGGCTCCTTCGATGCCGGCACCGCAGCCGTTCACACAAGCGCCGGTATCGTCCGCGCCCATCGACGCCTTGCTGCCGGCCTCCTCGGGCGCCGACGTGTTCTCCGACCTGTTCGGCGAGGGCACGCTGCCCATCGGCGATACGCAGCCCACCGTGGCGATGCCGCCGCCAGTGCCGCGTGCGCCGGTGCAATCGCCGCCTCCTGCTGTGCCTCCCGTTCAAGTGCATGTGCCGGCCCCGCCGCCGCCGCCCATGCCCGCGCAGGCACCGCCAAAGGCCATTCCGGCCTCATCGCAGATTCCCTCCGCCGAAGACTGGGACGCCATCCTCGCGAACGCGCCGCGTCGCATCGACAGCACGCCCGCGCCGATGCCCGACCCGATGGCGCACGAACCCTTCGAGCTGCCGTCGCAGGCGCGCCGGAACCCGGTCGACCCGCTCGCGGAAATGAACCCGCAGTCGGCCCACGACATGTCCGACATCGCGCTCAAGCGCGGAGTCGATCCGCTTTCCTTCTTCGCGGCCGACGACAGTGCGCACTCGCCGCTGTCCGACCCGCGCCCCACCGCGCTCACGCAGCACGACGCCGGGCTTCCCGGCGACGTGCATCCCGCGCTCGACCTGCTGCAGAACAACAAGCCGGCAGTGCCGGGATACAGCCATTCGAACCATGCGCGAGAAGTGACGGCGCAGTTCCGTCCGCCGTTGCCGGCGGCGCCAGTGCCGGTGCCACCACCTCCGCTTGCGCCGGCACCAGTCGTCGCCGTGGAGAAGATCGAGGAACCGCCCCCTCCTCCACCCCCTCCACCTCCGGCGCCACCACCGGTCGTCGCCGCCGTGCCGGTCGCCCCGGCAGTGGTCGCCACCTCGCCGTCGCCATCGCCGTCGCCCGCTACATCGACCACCGACTCCTCATCGGAAGCCCTCTTCAAGGCCTTCCTCGAAGGCGCGGGCGTGCCCGAGATCGCCGGCCAGCAGCCGCTCGACATCGAGGCCATGCAACGCCTGGGCCGCATCATGCGGGCCTTCACCGACGGCACCATCGAGCTGCTGTCCTCGCGCGCCATGCTCAAGCGCGAGGTGCGCGCCGAGATCACGATGATCGTGGACGAGGAGAACAACCCGTTCAAGATCCTGCCCAACGGCCGCGCCGTGCTGATGCAGATGTTCGGCGCACGCATGCCCGGCTTCCTGCCGCCCGAAGCCGCCGTGCACGACGCGCTGGGCGACCTGCAGTCGCACCAGCTCGGCATGGTCGCCGGCATGCGCGCCGCGCTGCTCACGCTGCTGCAGCGCTTCGACCCCGCGGCGCTGAGCAGCAACACGCCGCACGACGGCGGCATCGGCGAGAAGCTGCTGCCCGGCGGCCGCGAGGCCCGCCTGTGGCGCGAGCTGCAACAGCTGCATACCGAAACGACCGCGGCCGTCGAAGACGACTTCCAGGCCGTCTTCGGCCGCGCCTTCCAGCAGGCCTACGACAAGGAAATGGAACGACTGAAGGAGGCGCGCCGTGCCTGA
PROTEIN sequence
Length: 629
MRWTVIEHAGKPVATGPSALLAAPGGTIGRSPDNHLVLPDEQRQISRLQATVRFDEDGAAVLRNMSAVLPISVNGRTLVHEQEARVADGDRVEIGSYVLEAASALRAAPAVVVAPPPPQAPPLQAPSMPAPQPFTQAPVSSAPIDALLPASSGADVFSDLFGEGTLPIGDTQPTVAMPPPVPRAPVQSPPPAVPPVQVHVPAPPPPPMPAQAPPKAIPASSQIPSAEDWDAILANAPRRIDSTPAPMPDPMAHEPFELPSQARRNPVDPLAEMNPQSAHDMSDIALKRGVDPLSFFAADDSAHSPLSDPRPTALTQHDAGLPGDVHPALDLLQNNKPAVPGYSHSNHAREVTAQFRPPLPAAPVPVPPPPLAPAPVVAVEKIEEPPPPPPPPPPAPPPVVAAVPVAPAVVATSPSPSPSPATSTTDSSSEALFKAFLEGAGVPEIAGQQPLDIEAMQRLGRIMRAFTDGTIELLSSRAMLKREVRAEITMIVDEENNPFKILPNGRAVLMQMFGARMPGFLPPEAAVHDALGDLQSHQLGMVAGMRAALLTLLQRFDPAALSSNTPHDGGIGEKLLPGGREARLWRELQQLHTETTAAVEDDFQAVFGRAFQQAYDKEMERLKEARRA*