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SCNpilot_cont_300_bf_scaffold_415_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 29715..30752

Top 3 Functional Annotations

Value Algorithm Source
p-type conjugative transfer atpase trbb n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EML9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 345.0
  • Bit_score: 630
  • Evalue 8.70e-178
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AIJ47392.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 345.0
  • Bit_score: 634
  • Evalue 1.10e-178
p-type conjugative transfer atpase trbb; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 345.0
  • Bit_score: 624
  • Evalue 1.50e-176

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGAGTGCCGTTCCTTCCTCCTTTACCGCCACCTCGCTGGACCGCCGCATCCAGATGCTGCGCACGGCGATGGGCCCGCTCATCGCCGCCGCGCTCGAAGACCCGGACGTGGTGGAGATCATGCTCAATCCGGATCGCACGCTCTGGATCGACCGGCTTTCGACCGGCCGCGCACCGATGGGCGTGGAACTGCCCGAAGCCGATGGCGAACGCATCATCCGGCTGGTGGCCGCCCACGTTGGCGCGGAAGTGCATCGCGGCCAGCCGCTCTTGACGGCAGAGCTGCCCGAGACCGGTGAGCGCTTCGAGGGCATCCTGCCGCCGGCCGCGCCCGGCCCGGCCTTCGCGCTGCGCAAGCGCGCCCTGGGGCTGATCCCTTTGGCGCGCTATGTCAGCGACGAGATGATGAGTGGCGCGCTGGCGGGCTTTCTGGTGCGCGCCGTGCGCGAGCGCCAGAACATCCTGATCGCTGGCGGCACCAGCACCGGCAAGACGACGCTCGCCAACGCCTTGCTGGCCGAGATCGCCGCCACGGGCGATCGCGTGCTGGTGCTCGAAGACACGGTGGAGCTGCAATGCGTCGCCCGCGACCACGTGCCGTTGCGCACGCGCCAGGGCGTCGTGTCCATGCAGGAGCTGGTGCGCTCCTCGATGCGCCTGCGCCCCGATCGCGTCGTGGTGGGCGAGGTGCGCGGCGCCGAGGCGCTGGATCTCATCAAGGTCTGGGGTACCGGTCATCCGGGCGGCATCGCCACCATCCACGCCGGCTCTCCCTTGGGCGCGTTGCTGCGCCTGGAGCAACTGATTCTCGAAGTAGCGGTGAACCCGCCGCGCGCGCTGATCGCCGAGGCGGTCAACGTCGTGGTCCACATCGCTGGCCGCGGGCGCAAGCGCCGCATCGAGAGCATCGCCCGCGTCGTCGGCTTCGACGGCGCGGGCTATCACCTGGCGGATGCGCTGGAAGCGCCGTTTCCCGAGCTGCTGCCGCAGTCCGACCTTTCATCCCTGTCCCCTGAGCACTCTGGAGAACTGCCATGA
PROTEIN sequence
Length: 346
MSAVPSSFTATSLDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWIDRLSTGRAPMGVELPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRALGLIPLARYVSDEMMSGALAGFLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTVELQCVARDHVPLRTRQGVVSMQELVRSSMRLRPDRVVVGEVRGAEALDLIKVWGTGHPGGIATIHAGSPLGALLRLEQLILEVAVNPPRALIAEAVNVVVHIAGRGRKRRIESIARVVGFDGAGYHLADALEAPFPELLPQSDLSSLSPEHSGELP*