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SCNpilot_cont_300_bf_scaffold_417_curated_14

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15636..16499

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003721C63 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 287.0
  • Bit_score: 550
  • Evalue 7.30e-154
livM; Branched-chain amino acid transport system permease protein LivM similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 283.0
  • Bit_score: 443
  • Evalue 5.10e-122
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 288.0
  • Bit_score: 453
  • Evalue 2.20e-124

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Taxonomy

RIFOXYC12_FULL_Burkholderiales_65_23_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGAAGCCTTCGACAACTTCTGGTCGGTCTACAGCAACCTGGTGCTCTCGCTGGGCATCAACGGGCTGCTGGCACTCTCGATCTGGCTCACCCTGGCCTGCGGCATGCTGGCGCTGGCCAATGCAGCCTTCATGGGCATCGGCGCGTACACCGCGTCGATCCTCACGCTGAACTACGGCGCGCCGTTCCCGGTGGCCATTGCCGCCGGCATGGCCGCGCCGGCGCTGGTCGCCTTCATCATCGGCAAGCCCACGCTGCGGCTGTCGGGCGTGTACCTGGCCATGGCCACGCTGGCCTTCGGCGAGGTGGTGCGCATCGCCATCCTGAACGCCGAATCGCTCACGGGCGGCGCGCTGGGCCTGAACGGCATTCCGCAATCCACCGAGTGGTGGCACGTGGCGCTGGCGCTGGTGCTCACGCTGGTGGTGCTGTGGCGCATCCGCCGCTCCAAGGTCGGCCGCGCCTTCGAGGCCATCAAGGAAGACGAAACCGCCGCCGGCCTGATGGGCATCGACGTGGCGGGCCACAAGATGCTGGCCTTCGTGCTGGGCGGCGCCATCGCCGGCCTGGCGGGCACGCTGAACGCGCACCTGACCTTCTTCATCGGCCCGGCCGAATACGGCTTCAACCGCGCGGTCGACATCCTGACGATGGCGATCCTCGGCGGCATCGGCAGCCTCACCGGTCCGGTGCTGGGCGGCACCATCCTCACGCTGCTGCCGGAAACGCTGCGCGGCCTGGGCGCGTTCCGTCTCGTGGTCAACGGCTTCATCCTGGTGCTGATCGTGCTGTTCCTGCCCAAGGGCATCTGGGACCCGGCGCGCATCCGCCAGTGGTTCGGCCGCAAGGGGAGCGCGGCATGA
PROTEIN sequence
Length: 288
MEAFDNFWSVYSNLVLSLGINGLLALSIWLTLACGMLALANAAFMGIGAYTASILTLNYGAPFPVAIAAGMAAPALVAFIIGKPTLRLSGVYLAMATLAFGEVVRIAILNAESLTGGALGLNGIPQSTEWWHVALALVLTLVVLWRIRRSKVGRAFEAIKEDETAAGLMGIDVAGHKMLAFVLGGAIAGLAGTLNAHLTFFIGPAEYGFNRAVDILTMAILGGIGSLTGPVLGGTILTLLPETLRGLGAFRLVVNGFILVLIVLFLPKGIWDPARIRQWFGRKGSAA*