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SCNpilot_cont_300_bf_scaffold_417_curated_23

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 24555..25133

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CRL8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 187.0
  • Bit_score: 355
  • Evalue 3.90e-95
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17748.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 192.0
  • Bit_score: 356
  • Evalue 2.50e-95
ABC-type metal ion transport system, periplasmic component/surface adhesin similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 192.0
  • Bit_score: 341
  • Evalue 1.80e-91

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAGCACACCCGTCTCCGACGCACCACCGGTCTCGCAATCGCAGCCGCGCTGTTCGCGGCCGCCCCCTTTCTTTCCGCGCAGGCACAGCAGCAGCATGCGCATGTGCACGGCCAGCTCAAGCTCGACGTGGCCGTCGACGGCCCCACGGTGGTGATCGACATGGAGTCGCCGCTGGACAACATCGTCGGCTTCGAGCGCGCGCCCAAGACCGACGCCGAGAAGAAGACCGTCGAAGACGCCGTCGCGCAGCTGCGCGCGGCCGACAAGCTCTTCGTCGTCGATCCGGCCGCCAACTGCAAGCTGGGCCCGGTCGACCTGCGCTCCGGCGCGCTGGGCCTGGGCAACCCCGACCCGGCCGAGCCCGTCGGCCATGCCGACCTCGACGCCACCTTCTCCTTCAATTGCACCAACGCGGCCGCAGCGAAGTTCATCGACGTGAACCTGTTCGGCGCGTTCAAGGGGCTGCGCCAGATCGATTCGCAGATCGCCACCGCGCAAGGCCAGTTCAAGCGCCAGCTCAAGCGCCCCGCGGGCGCGCAGGCATCGCAGCCGGTGCGGCTGGGCTGGGGCAAGTGA
PROTEIN sequence
Length: 193
MKHTRLRRTTGLAIAAALFAAAPFLSAQAQQQHAHVHGQLKLDVAVDGPTVVIDMESPLDNIVGFERAPKTDAEKKTVEDAVAQLRAADKLFVVDPAANCKLGPVDLRSGALGLGNPDPAEPVGHADLDATFSFNCTNAAAAKFIDVNLFGAFKGLRQIDSQIATAQGQFKRQLKRPAGAQASQPVRLGWGK*