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SCNpilot_cont_300_bf_scaffold_250_curated_37

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(51145..52296)

Top 3 Functional Annotations

Value Algorithm Source
Fucose permease n=1 Tax=Variovorax sp. CF313 RepID=J2KYT6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 383.0
  • Bit_score: 684
  • Evalue 7.30e-194
Fucose permease {ECO:0000313|EMBL:EJL78158.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 383.0
  • Bit_score: 684
  • Evalue 1.00e-193
putative transporter, MFS-type similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 383.0
  • Bit_score: 627
  • Evalue 3.30e-177

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGTGGCCATCACCGCCGCCACGCGCTGGGCATCGCGCGCGCAATTCTTTTCCGCCGGTTTCATCTTCGCGACCTGGGGCGTGCACGTGCCCACGGTCAAGTCGCACTACGGCATCGACGAAGCACAACTGGGCCTCGCCATGCTGGCAGCCGGCGCCGGGGCGATGGTCGGACTGACCAGCGCGGGCCGCTGGATCGGCCGCTACGGCCCGCGCCGCATGGCCGGCGTCTGCGGCTGCATCTACGCGCTGCTGCTGGCTGGCCTCATCGCCATGCCGGGCTATGCGGCGCTGCTGGGACTATTGGCCGCCTTCGGCCTCGTGACCAGCGTGTTCGACGTGTCCATCAACACCGAAGCGGCGCAGCTCGAACTGCACGGCGACACCCCCTTGATGAGCGGCATGCACGGCATGTTCAGCCTGGGCGGCATGGCCGGTGCCGCGAGCGGCAGCGCGGCGCTCGCGGCCGGGCTCGGCCCGCAGGCGCACCTGCTGCTGGTCGCCGCGGCAATGGTGCTGCTCGTCGCCGTGGCTTCGCGGCGCATGCTGCCCCGCCCCGCCACCAGCGGCGCGACCGAGGCCGACCATGGCTTCCTGCTGCCGCGCGGCACGCTGGCGGTGCTGGGCGTGCTCGCCGCGCTGGGCCTGATCGCCGAAGGCGCCATCTACGACTGGAGCGTGCTCTACATGCAGCAGGAAATCGGCAGCCCGCAGCAGCAGGCGGCGCTGGCGTATGCGAGCTTCTCGGCGGCGATGGCGGCAGCGCGCTTCGGTGGGGACGCCATGCGTGCCCGCTTCGCCCCGGCCACCTTGCTGCTAGGCAGTGGCCTGTTGGCCGCTGCTGCCATGACGCTCGTGCTCGTCACCGACATGCCGTGGCTTGCGCTGGTGGGCTTTGCAGGCGTGGGCGTGGGCTTTGCGAACGTGGTGCCGATCCTGTTCTCGGCCTCGGCAAGAGTGCCGGGCGTCGAGCCCGCACGCGGCATTGCGTCGGTCTCGGCCGTGGCTTACCTGGGGTTCATGGCAGGCCCCGCGGTGATCGGCCTGCTGGCACGGGCGACCTCGCTGACCGCCGCGCTCTATGTGGTCGTGGCCTTCGCCGTGGCGCTGGCAGCGTCCGCGCGCTACACCGCCAGCAGCGAAAGCAAATAG
PROTEIN sequence
Length: 384
MVAITAATRWASRAQFFSAGFIFATWGVHVPTVKSHYGIDEAQLGLAMLAAGAGAMVGLTSAGRWIGRYGPRRMAGVCGCIYALLLAGLIAMPGYAALLGLLAAFGLVTSVFDVSINTEAAQLELHGDTPLMSGMHGMFSLGGMAGAASGSAALAAGLGPQAHLLLVAAAMVLLVAVASRRMLPRPATSGATEADHGFLLPRGTLAVLGVLAALGLIAEGAIYDWSVLYMQQEIGSPQQQAALAYASFSAAMAAARFGGDAMRARFAPATLLLGSGLLAAAAMTLVLVTDMPWLALVGFAGVGVGFANVVPILFSASARVPGVEPARGIASVSAVAYLGFMAGPAVIGLLARATSLTAALYVVVAFAVALAASARYTASSESK*