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SCNpilot_cont_300_bf_scaffold_250_curated_40

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 53721..54290

Top 3 Functional Annotations

Value Algorithm Source
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Variovorax sp. CF313 RepID=J3CTZ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 334
  • Evalue 7.00e-89
Putative metal-binding protein, possibly nucleic-acid binding protein {ECO:0000313|EMBL:EJL78161.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 334
  • Evalue 9.90e-89
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 185.0
  • Bit_score: 319
  • Evalue 9.60e-85

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGAAGAGAGAATTTGCCCCCGAACGGCTCAACGTGCCCGCCTTTGCCGCGGCCGCCGCAACCATTGAAGCCGCCGACCCGGTTCCGAACTACGCGCGCCTGACCGCCGAATTGGCAGCGCCTGCGCCCGATGCGGTGGTCGATTGGGTTGCCAGCGGAGAAGAGCGCCCCGGCGCCGACGGCAAGGCCGTTCCCTGGCTGCATCTGGACGCTGAAGCCACGGTGCCGCTGGTCTGCCAGCGCTGCCTGTCGCCGGTCGACACCCTGCTGTCGGTCGACCGCTGGTTCCGTTTCGTGGCCGACGAGGCTGCGGCCGAGGCGGAAGACGAGGAATCGGAGGAAGACCTGCTCGTCGTGAGCCGCGATTTCGACCTTCATGCCCTGATCGAAGACGAGCTGCTGATGGAAATCCCCGTCATGCCCGTCCACGACGTCTGCCCGACGCCCGTCCAGCTGTCGTCCAGCGACGAGGACTTTCAAGCTGCCGAAGAAGCCAAGCCAAACCCGTTCGCGGTGCTCGGCGCGTTGCGTTCGCGCAAGCCCGAAGACGGGTCGGACGAGGGCAAGTAG
PROTEIN sequence
Length: 190
MKREFAPERLNVPAFAAAAATIEAADPVPNYARLTAELAAPAPDAVVDWVASGEERPGADGKAVPWLHLDAEATVPLVCQRCLSPVDTLLSVDRWFRFVADEAAAEAEDEESEEDLLVVSRDFDLHALIEDELLMEIPVMPVHDVCPTPVQLSSSDEDFQAAEEAKPNPFAVLGALRSRKPEDGSDEGK*