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SCNpilot_cont_300_bf_scaffold_250_curated_41

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 54437..54619

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L32 n=4 Tax=Variovorax RepID=RL32_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 126
  • Evalue 7.20e-27
rpmF; 50S ribosomal protein L32 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 126
  • Evalue 2.30e-27
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 126
  • Evalue 1.00e-26

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGGCCGTCCAGCAAAACAAGAAGTCGCCTTCCAAGCGCGGCATGCACCGTTCCCACAATGCGCTGGTCGTGCCCGGCATCGCCGTTGAGCCGACCACCGGCGAAACGCACCTGCGCCACCACATCAGCCCCAACGGTTTCTACCGTGGCCGTCAGGTGCTCAAGAACAAGTCTGAAGCCTGA
PROTEIN sequence
Length: 61
MAVQQNKKSPSKRGMHRSHNALVVPGIAVEPTTGETHLRHHISPNGFYRGRQVLKNKSEA*