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SCNpilot_cont_300_bf_scaffold_214_curated_64

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(104969..105580)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusG n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6J6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 1.30e-109
nusg antitermination factor; K02601 transcriptional antiterminator NusG similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 4.20e-110
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 1.90e-109

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACCGACGACGCAGTTGAAACCACGCCGAGCACGCCGGAAGAAGAAAACACTTCCGTGCTGGCTCCCGCCGCCAACCCAGATCTGCGTTGGTACGTGGTGCATGCCTATTCGGGCATGGAGAAGGCCGTCGAGCGCAACATCACCGAGCGCATCAACCGCGCCGGCATGCAGGACAAGTTCGGCCGCATCCTGGTTCCGACCGAAGAAGTGGTCGAAATCAAGAACGGCCAGAAGCGCACCACCGAGCGTCGCTTCTTCCCGGGCTACGTGCTGGTCGAAATGATCATGGACGACGAGAGCTGGCACCTGGTGAAGCACACCAACAAGGTGACGGGCTTCGTGGGTGGTGCCAAGAACCGTCCGGCTCCGATCTCGCAAAAAGAGGTCGAAGACATCGTCAGCCAGATGCAACAGGGCACCGAGAAGCCGCGCCACAAGGTCGAATTCACCGTCGGCGAATTCGTGCGCGTCAAGGAAGGCCCGTTCACCGACTTCAACGGCACGGTCGAGGAAGTCAACTACGAGAAGAGCAAGGTCAGCGTGTCGGTCATGATTTTCGGCCGCGCCACCCCTGTGGAACTCGAATTCAGCCAGGTCGAGAAGACCTGA
PROTEIN sequence
Length: 204
MTDDAVETTPSTPEEENTSVLAPAANPDLRWYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVEIKNGQKRTTERRFFPGYVLVEMIMDDESWHLVKHTNKVTGFVGGAKNRPAPISQKEVEDIVSQMQQGTEKPRHKVEFTVGEFVRVKEGPFTDFNGTVEEVNYEKSKVSVSVMIFGRATPVELEFSQVEKT*