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SCNpilot_cont_300_bf_scaffold_190_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27662..27934

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein n=4 Tax=Variovorax RepID=C5CUL1_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 175
  • Evalue 2.60e-41
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 175
  • Evalue 8.20e-42
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33599.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 175
  • Evalue 3.70e-41

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAACAAGACCGAACTGATTGAGCACATCGCAAAGAACGCCGACATCTCCAAAGCCGCAGCGACCCGTGCGCTCGAATCCACGATCGGCGCCATTCGTACCACGCTCAAGAAGGGCGGCTCCGTTTCGCTCGTCGGTTTCGGCACTTTCGCAGTAGGCAAGCGGGCTGCCCGCACGGGCAGAAATCCCCGCACCGGCGACGCGATTAAAATCAAGGCCGCCAAGATTCCGAAGTTCCGTCCAGGCAAGGCGCTGAAAGACGCGCTGAACTAA
PROTEIN sequence
Length: 91
VNKTELIEHIAKNADISKAAATRALESTIGAIRTTLKKGGSVSLVGFGTFAVGKRAARTGRNPRTGDAIKIKAAKIPKFRPGKALKDALN*