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SCNpilot_cont_300_bf_scaffold_190_curated_199

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 201427..201888

Top 3 Functional Annotations

Value Algorithm Source
peptide-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000370635D similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 154.0
  • Bit_score: 275
  • Evalue 2.40e-71
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 263
  • Evalue 5.10e-68
Uncharacterized protein {ECO:0000313|EMBL:ACS20017.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 263
  • Evalue 2.30e-67

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGTCAGATTCAGCCGATGGTCCGCCCTCCTGCTCGCTTTCGTTCTCTCCTGGGTGGCCTTGCCGTCCGCTTTTGCCGCGCAGCAGCAGATGGTCAGCGTGGCCGTGAAGACGCTGAACATGCGCACCGGCCCGGGCCCGCGTTACGAGACGCATTGGACGGTCAGCAGGGGCTATCCGTTCAAGGTGATCGGCCGGAAGGGCGATTGGCTCCACGTCAGCGACTTCGAGGGCGACAAGGCCTGGGTGTTCCGGTCGATGACCAACAAGACGCCGCACCATGTCGTGAAGGCGCAGGTGGCCAACCTGCGGCGCGCGCCCAACACCCGCAGCCCCGTCATGAAGAAGGCCGGCTACGGCGACGTGCTGCGCACCATCGAGCGCCGGGGCGACTGGATCAAGGTGCGGCACGAAGGCGGCACCACCGGCTGGGTGCAGAAGCGCCTGACCTGGGGCTGGTAG
PROTEIN sequence
Length: 154
MVRFSRWSALLLAFVLSWVALPSAFAAQQQMVSVAVKTLNMRTGPGPRYETHWTVSRGYPFKVIGRKGDWLHVSDFEGDKAWVFRSMTNKTPHHVVKAQVANLRRAPNTRSPVMKKAGYGDVLRTIERRGDWIKVRHEGGTTGWVQKRLTWGW*