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SCNpilot_cont_300_bf_scaffold_53_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4140..5138

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 601
  • Evalue 9.90e-169
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 321.0
  • Bit_score: 589
  • Evalue 6.70e-166
Pseudouridine synthase n=1 Tax=Variovorax sp. CF313 RepID=J2L3X6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 601
  • Evalue 7.10e-169

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
TTGGGCAATACCCCCGAGCATCTGGAGGCGGCCGAACACGAGGAAGGCGCCGACCCGGCCGAGGCCAGCGAGCTGCGGCCCTTCATCATCGATTCGGCGCAGCACGGCCAGCGGCTCGACCGCGCGCTGGCCGCGCTGGTGCCCGAATTTTCCCGCAGTTACCTCCAGCAACTCATCGAGGCCGGCGCCGTGGAGCTGCAGGGGCGTACTGTCACCAAGGTCTCGGCCGGCGTCAAGGCGGGGCAGGCAGGGCGCATCGAACTGCGGCCCACGCCCCAGAGCCAGGCTTTCCGGCCCGAGACGATGGACCTCGTCACCGTGTACGAGGACGAGCACCTGCGCATCGTCGACAAGCCCGCCGGGCTGGTCGTGCATCCGGCGCCCGGGCATTGGAGCGGCACGCTGCTCAACGGACTGCTGGCGCTCGATCCGAAGGCCGCGCTGCTGCCGCGCGCCGGCATCGTGCACCGGCTCGATCGCGACACCAGCGGGCTGATGGTGGTGGCCCGCACGCGGGCGACCATGGACGCGATGGTCGCGCTGATCGCCGCGCGCGAGGTCAAGCGGCAGTACCTGGCAATCGGGCACAAGCCCTGGGTCGGCGCGGCGGCCCGGCAGGTCGATGCGCCCATCGGGCGGGATCCGCGCAATCGGCTGCGCATGGCCGTGGTCGACCTGGAGCGTCATGCGGGCAAGACCGCGCGCACGCTGATCGAGCGGCTCGACAGCCATTCCGAAGGCTGCGTGGTGCGTTGCACCCTCGAAACCGGCCGCACCCATCAGATCCGCGTGCACATGGCGTCGATCGGGCATCCGTTGGTGGGAGACGCGCTTTATGGCGGCGCGCCGGCCGTCGGCCTGTCGCGCCAGGCGCTGCATGCGTTCCGGCTGGCCTTCGTGCATCCCGTCACGCAAGAGCCCATGGAGTTCCGATCGCCGCCGCCGCCGGACCTCATTCAGGCTTTGCAGTCCTGGGGGCTGGTTTACAATCGCGCCTGA
PROTEIN sequence
Length: 333
LGNTPEHLEAAEHEEGADPAEASELRPFIIDSAQHGQRLDRALAALVPEFSRSYLQQLIEAGAVELQGRTVTKVSAGVKAGQAGRIELRPTPQSQAFRPETMDLVTVYEDEHLRIVDKPAGLVVHPAPGHWSGTLLNGLLALDPKAALLPRAGIVHRLDRDTSGLMVVARTRATMDAMVALIAAREVKRQYLAIGHKPWVGAAARQVDAPIGRDPRNRLRMAVVDLERHAGKTARTLIERLDSHSEGCVVRCTLETGRTHQIRVHMASIGHPLVGDALYGGAPAVGLSRQALHAFRLAFVHPVTQEPMEFRSPPPPDLIQALQSWGLVYNRA*