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SCNpilot_cont_300_bf_scaffold_53_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 9684..10538

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Variovorax sp. CF313 RepID=J2L3Y1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 284.0
  • Bit_score: 507
  • Evalue 9.10e-141
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:EJL79953.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 284.0
  • Bit_score: 507
  • Evalue 1.30e-140
pilW1; type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 284.0
  • Bit_score: 503
  • Evalue 3.20e-140

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGCATGGCCTTTCCGATGACGACCGCTAGCGCGCAGCGAATGCTGGCCGCGAGTTTTGCCGGCGTCGCCGTGACGTTTTTGCTCGCCGGTTGCGTCAGCACGCGCACCACCACCACGAGCCTGGCCGACACCAGTTCGGGCAAGGGCGTGGACATCGTCACCGAGTCCGACGAAAGCTCCCGCCAGCGCCGCGCGCGCCTGCGCATGGAGCTGGCCTCGGGCTACTTCGAGCAGGGCCAAACCAACGTCGCGCTCGACGAGATCAAGCAGGCGCTCGCCGCCGACCCGAACAATTCGGACGCGTACAACCTGCGCGGCCTGGTCTACATGCGGCTCGACGACGCCGGCATGGCCGAAGACAGTTTTCGCCGCGCCATTGCCATCAATCCGCGCGACCCCAACACGCGCCACAACTACGGTTGGCTGCTGTGCCAGCAGAACCGCTACGGCGATGCGGCAACGCAGTTCAACGAGGCGCTCGCCGTGCCCAGCTACGCCGACCGTGCCAAGACGCTCATGACGCGTGGCGTCTGCGAGCTCAAGGCGGGCCAGCGCGCGCAGGCCGAGCGCACCCTTCAGCAGGCCTACGAGATCGACGCCAGCAACCCGGTGGTCGGTTTCAACCTGGCCCTGGTGCTCGCGCAGCGCGAAGAATGGTCGCGTGCGCAGTTCTACATTCGCCGCGTCAACAACAGCCCTTCGGCCAGCGCCGAAACGCTGTGGCTCGGCATCAAGATCGAACGAAAGCTCAACAACCGCGAGGCATTGGCGCAGTTGGGAGGTCAACTGCAACGACGCTTCCCCCAGTCGCGGGAGGCATCAGCGTACGAGCGCGGGAATTTCAATGATTGA
PROTEIN sequence
Length: 285
MSMAFPMTTASAQRMLAASFAGVAVTFLLAGCVSTRTTTTSLADTSSGKGVDIVTESDESSRQRRARLRMELASGYFEQGQTNVALDEIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYGWLLCQQNRYGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDASNPVVGFNLALVLAQREEWSRAQFYIRRVNNSPSASAETLWLGIKIERKLNNREALAQLGGQLQRRFPQSREASAYERGNFND*