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SCNpilot_cont_300_bf_scaffold_53_curated_13

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12784..14094

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 436.0
  • Bit_score: 781
  • Evalue 7.00e-223
histidyL-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 436.0
  • Bit_score: 778
  • Evalue 1.00e-222
Histidine--tRNA ligase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0U0_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 436.0
  • Bit_score: 778
  • Evalue 3.20e-222

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
ATGGCTGATAAATTGAATGCCGTCAAAGGCATGAACGACATATTGCCGCCCGAATCGGCGCGCTGGGAGTGGCTCGAGGCCACCGTGCGCGACCTGATGGGGCGGTTTGCGTACCGCAACGTCCGCACGCCGATCCTGGAACGCACGGCACTCTTCGTGCGCGGTATCGGCGAAGTGACCGACATCGTCGAGAAGGAGATGTACTCCTTCGAGGACCGCGCCGACAAGCACGGCAAGTTCGAGCACCTGACCATGCGCCCGGAGAACACCGCCGGCCTGGTGCGCGCGGTGATCGAGCACAACATGCTGTACGAAGGGCCCAAGCGCCTCTGGTACACCGGCCCGATGTTCCGCCGCGAGAACGTGCAGCGCGGGCGTTTCCGCCAGTTCCACCAGATCGGGGCCGAAGCGCTGGGCTTTGCAGGCCCGGACGTCGATGCCGAGCTGATCCTGCTGGCGAACGCACTCTGGAAGGCCATCGGCCTGACCGATGTTCGCCTCGAGCTCAACAGCCTGGGACAGCCTGCCGAACGCGCGTTGCACCGCACCGAACTCATCGCGCACTTCGAGAAGCACGCTGACAAGCTCGACGAAGATGGCAAGCGCCGCTTGCACAGCAACCCGCTGCGCATTCTCGACACCAAGAATCCGGCAATGAAGGACGTGGTCGAGTCGGCACCTAAGCTGATCGACTTTCTCGGTGCCGAATCGCTCGCGCACTTCGAGGGGCTGCAAGCCATCCTCAAGGCCAACGACATTGCATTCACGATCAATCCGCGCCTCGTGCGCGGGCTGGATTACTACAACCTCTCGGTCTTCGAATTCGTGACCGACCGCCTGGGTTCGCAAGGCACGGTGTGTGCCGGTGGGCGTTATGACGACCTGATCGCGCAGATCGGCGGCAAGCCCGCGCCGGCCGTGGGTTGGGCCATGGGCGTGGAGCGCGTGCTCGACCTGCTCAAGGAGCAAGGTGCCGAAGTGCCGGCGCCAGTGCCCGACGCCTATGCCATCGTGCCCGATGCAGCGTCCATGCCGGTCGCGCTGCGTACGCTGCAGCAGCTGCGCGAAAGCGGCGTGCGCGTGCAGATGCATGCGGCAACCGTCGACGGCCTCAGCGGCTTCAAGGCGCAGATGAAGAAGGCGGATGCCAGCGGCGCAACCTACGCCCTAATCTTCGGCGCCGATGAACTCGCACGCGGCGAGGTGACTCTCAAGGCGTTGCGCGACGGAAGCGGCGCGCAAACTTCCCGAGCACTTGCTGAAGCCCCCATCTGGGCCGCCACCCTACAATCGCCGGCTCCCAACACCTGA
PROTEIN sequence
Length: 437
MADKLNAVKGMNDILPPESARWEWLEATVRDLMGRFAYRNVRTPILERTALFVRGIGEVTDIVEKEMYSFEDRADKHGKFEHLTMRPENTAGLVRAVIEHNMLYEGPKRLWYTGPMFRRENVQRGRFRQFHQIGAEALGFAGPDVDAELILLANALWKAIGLTDVRLELNSLGQPAERALHRTELIAHFEKHADKLDEDGKRRLHSNPLRILDTKNPAMKDVVESAPKLIDFLGAESLAHFEGLQAILKANDIAFTINPRLVRGLDYYNLSVFEFVTDRLGSQGTVCAGGRYDDLIAQIGGKPAPAVGWAMGVERVLDLLKEQGAEVPAPVPDAYAIVPDAASMPVALRTLQQLRESGVRVQMHAATVDGLSGFKAQMKKADASGATYALIFGADELARGEVTLKALRDGSGAQTSRALAEAPIWAATLQSPAPNT*