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SCNpilot_cont_300_bf_scaffold_53_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32019..32498

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000367FA70 similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 166.0
  • Bit_score: 217
  • Evalue 1.10e-53
Ribosomal protein L7/L12 {ECO:0000313|EMBL:EJL79973.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 163.0
  • Bit_score: 192
  • Evalue 3.90e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 166.0
  • Bit_score: 187
  • Evalue 2.80e-45

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGATGACCTTCCACCGGAGGCCATTGCGGCGCTGCGGCGGGGCAGGCTGATCGAAGCCATCAAGATCGTGCATGACAGCACCGGCATGGATCTCCAGTCGGCCAAGGACGCCGTCGAGCGTTACGCCGCCTGGATGGGGGATCCCGGCCGCCGTTCGCCCGATGTGGCCGCGCAGGACCGCGGCTTCGCGTCGATGCCTTCCACCGCGCTGACCGCGCTGGCGCAGGGCGACAAGATCGAAGCCGTGCGCCTCACGCGCGAAGCCACCGGCCTGAGTCTCGCGGCCGCCAAGCGGCTGGTCGATAACCACGAGCACCCGCCGGTCGGCGCCTTCGGCCACCTGCCGTCCGAAATACCCCGCCGCCCGATGGTCGACGAGCCGGGCCGCGTGCCTGCCGGCGGCTACAACTGGCTGCCGGTGACCGTCATCCTGCTGGCCATGCTGATGGTCTGGCTGTTGTTTGGAAAAGAGCTCTGA
PROTEIN sequence
Length: 160
MDDLPPEAIAALRRGRLIEAIKIVHDSTGMDLQSAKDAVERYAAWMGDPGRRSPDVAAQDRGFASMPSTALTALAQGDKIEAVRLTREATGLSLAAAKRLVDNHEHPPVGAFGHLPSEIPRRPMVDEPGRVPAGGYNWLPVTVILLAMLMVWLLFGKEL*