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SCNpilot_cont_300_bf_scaffold_53_curated_73

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 69861..70868

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000365D967 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 335.0
  • Bit_score: 644
  • Evalue 5.60e-182
putative ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 335.0
  • Bit_score: 619
  • Evalue 6.10e-175
Putative ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGU49520.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 335.0
  • Bit_score: 619
  • Evalue 2.70e-174

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGTCTTTCAAGTCCTTGCGTATCCTGGCCGCCGTCGCAGCGTCGATGGCTCTTCTGGCGGGCATGCCCGCGTCCGCGGCGGAGAAGGTGTCCGTGCGCCTCAAGTGGCTGGCGCAGGCGCAGTTCGCCGGCTTCTACGTGGCCAAGGCCAAGGGCTTCTATGACCAGGCCGGCCTCGACCTGACGATCAACCCGGGCGGCCCCAACCTCAACGTCGAAACGCTCGTGGCCTCCGGCAACGACACCTTCGGCCTGGCCGGCGGCACCGAGACCGTGCTGCTCGCACGCGAAAAGGGCCTGCCGCTGGTGTGCATCGGCGTGACCGTGCAGAACACGCCGTTCACCTACGTGACCTACAAGGATTCCGGCATCACCAAGGTGAAGGACTTCGCCGGCAAGAAGGTCGCGACCTGGTTCACCGGCACGCAGTACACGCTGTACTCGATGCTCGCCTCGGCCGGCGTGAAGCAGAGCGACCTGACCATCGTGCCCCAGTCCGGCTCCATGGCCCCCTTCGTCGAGAAGCAGTTCGACGTGGCCGCCGCCACCTACTACAACGAGCTCAACACGCTCAAGGAGCAGGGCCTGGGCGACAAGCTCACGCTCATCAAGCCCGACGACTACGGCGTGGTGGTGCAGCAGGACACGGTGCTCGTGTCCGAGAAATACCGCAACGAGAAGCCGCAGCAGGTGCAGGCTTTCATGAACGCCACCATCAAGGGCTGGAAGTACGCGCTGCAGAACAAGAAGGAAGCCATCGACATCGTCATGGCCGCCGCGCCCAGCCTGAACCGCGCGCACCAGGAAGCCATGCTCGACGAGTTCGAGAAGCTGGTGAAGGCCGGCAAGGGCACCACCGACGGCATCCTGGCCATCGACCTGCCGACCGTCGAGAAGATGCAGACGCAGCTCGTCGGCTACAAGGCGCTAAAGGCCCCGGCCGACCTGTCGAAGGCCTACGACGCCAGCTTCTGGAACCAGGTGCCGGCCGGCGACAAGAAGTTCTGA
PROTEIN sequence
Length: 336
MSFKSLRILAAVAASMALLAGMPASAAEKVSVRLKWLAQAQFAGFYVAKAKGFYDQAGLDLTINPGGPNLNVETLVASGNDTFGLAGGTETVLLAREKGLPLVCIGVTVQNTPFTYVTYKDSGITKVKDFAGKKVATWFTGTQYTLYSMLASAGVKQSDLTIVPQSGSMAPFVEKQFDVAAATYYNELNTLKEQGLGDKLTLIKPDDYGVVVQQDTVLVSEKYRNEKPQQVQAFMNATIKGWKYALQNKKEAIDIVMAAAPSLNRAHQEAMLDEFEKLVKAGKGTTDGILAIDLPTVEKMQTQLVGYKALKAPADLSKAYDASFWNQVPAGDKKF*