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SCNpilot_cont_300_bf_scaffold_59_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(19852..20802)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003823CF5 similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 314.0
  • Bit_score: 495
  • Evalue 3.00e-137
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24602.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 312.0
  • Bit_score: 421
  • Evalue 7.90e-115
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 310.0
  • Bit_score: 415
  • Evalue 2.20e-113

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Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGCAAAGCCACCTTCCAGCCCTTCCACCGCCGCCTCCGCCGCCTCCGCCGACCGCATCGAACTGATGCAGACCTTCGTGCGCATCGTCGAGGCCGGCTCGCTGTCCGCCGCGGCCGCGCAGATGGGCACCACCCAGCCCACCGTGAGCCGACGCCTGCAGACGCTGGAGCGCTCGCTGGGCGTGCGGCTGCTGCAGCGCTCCACCCACGCGATGAAGCTCACCGAAGACGGCGAGCGCTGTTTCGACCGCGCCCGGGAGCTGATCGTGAGCTGGAACGCCTTCGAGGCCGAAGTGCGCGGCGCCGGCGACCAGCCCGAGGGACGGCTGCGCGTGGTGGCGCCGCATGTGTTCGGGCAGAAGCTGCTGGTCGGGCCGCTGGCCGCGTATCTGCACCGCTACCCGCAGACGACGGTCGAATGGCTGCTGCACGACGGCCCGCAGGACCGCACGCCCGACTTCATCGCCGAGGGCGTGGACTGCGCCATTCGCGTCGGCGAGGTGACCGACCCGTCGGTGGTGGCGATCAGGCTGTCCGAGGTGCCGCGCATCGCGATCGGCGCGCCCTCGCTCCTGGGCAGCGGCCCGCCGCCGGTGCATGCCGGCGACCTGGAGGCCCTGCCCTGGCTGGCCGCGCGCAACTTCTACCGCACCGAGGTCGTGCTGACCCACGAGACCACGGGCGAGGTGTACCGGGTGCAGATCCGCCCGCGCATGATCACCGACAGCCTCAACGCCCTGTGCAGCGCGGCGGTGCTGGGCGTGGGCGTCGGCGTGCTGTCGACCTGGATGCTGGCCGAGGAACTCGCCGCCGGCCGGCTGGTGCACCTGGCGCCGCAGTGGCAGGCAGCCCATGCGCCGGTGTACATGGTGTACCCGTACGCGCGCTTCTACCCGGCGAAACTGCGGCTCTTCGTGGAGGCGATGCGCACCGCCTTTCCCGCCGCGTAG
PROTEIN sequence
Length: 317
MAKPPSSPSTAASAASADRIELMQTFVRIVEAGSLSAAAAQMGTTQPTVSRRLQTLERSLGVRLLQRSTHAMKLTEDGERCFDRARELIVSWNAFEAEVRGAGDQPEGRLRVVAPHVFGQKLLVGPLAAYLHRYPQTTVEWLLHDGPQDRTPDFIAEGVDCAIRVGEVTDPSVVAIRLSEVPRIAIGAPSLLGSGPPPVHAGDLEALPWLAARNFYRTEVVLTHETTGEVYRVQIRPRMITDSLNALCSAAVLGVGVGVLSTWMLAEELAAGRLVHLAPQWQAAHAPVYMVYPYARFYPAKLRLFVEAMRTAFPAA*