ggKbase home page

SCNpilot_cont_300_bf_scaffold_59_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(30988..32529)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2K9R1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 493.0
  • Bit_score: 906
  • Evalue 1.60e-260
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL76990.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 493.0
  • Bit_score: 906
  • Evalue 2.20e-260
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 476.0
  • Bit_score: 885
  • Evalue 9.10e-255

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGCCCGAACGCGGGAATATCGGCCTCATGGACTCGCTACCGCTCTACCGCCAGCTCGCCGCGCACTACGTGGATGCGATCCACACCGGCTCGCTCAAGCAGGGCGACAAGCTGCCGTCGCTGCGCAGCCTGATGCGGCTGCACGACATCAGCCTGTCGACCGCGCTGCAGCTCTGCCGCGCGATGGAAAGCGACGGTTGGGTCGAAGCGCGCGACCGCTCGGGCTACTTCGTGCGGCGGCCGCAGCGCATGGCCATCGCGCCCATGGAAGAGCCGGTGGCCGACGTGCCGCCCGATCCGGCGCAGTTCGTCAGCATGCGCGAGCGCATGGCCAACTTCATGGCGCGCGGGCGGCACACGGGCGTCAAGCTCAACTTCGCCATCGCCCGCGCGGCCCCCGAGCTGTATCCGGCCGAAGCGCTGCGCAACTCGATGACGCGCGCGCTGCGCCAGCGCCCGGAACTGCTGACCACCGCCTCCTCGCAGAAGGGCCACCTGCAGTTTCGCGAAGCGGTGGCGCAGCGCAACCTGCGCATCGGCATGACGGTGGCGCCCGACGAGGTGCTGGTCACCAACGGCTGCATCGAGGCGCTGAATCTCGCGCTGCGCGCCATCGCCAAGCCCGGCGACACGGTGGCCGTGGAGTCGCCCACCTTCTACGGCCTGCTGCAGGTGCTCGAGAGCCTGGGCATGCGCGCGCTCGAGATACCGACCAGCCCGCAGACCGGCATTTCCATCGAGGCGCTGGAGCTGGCCATCCAGACCTACGACGACATCAAGGCCGTGGTGGTGGTGCCGCACCTGCAGAACCCCATCGGCAGCGTGATGCCCGACGCCCACAAGCAGCGGCTGGTGCACCTGTGCGAGAGCCACGGCATCGCGCTGGTCGAGGACGACACCTACAGCGACCTGGTCGAGAGCGACACGCCGCTGCGCGCGCTGAAGTCATGGGACCGCACCGGCAACGTGATCTATTGCGCCTCGCTGCACAAGGTGCTGGCGCCGGGGCTTCGGCTGGGTTGGATCACCGCCGGGCGCTGGCATGCGCAGGTGGAAATGCTCAAGTACGCGCAGACCCGCAACAACGAGGCGCTGGCACAGATCGCGGCCGGCGAATTCATTGCGGGCGGTGCCTACGACCGCCACCTGCGCCGCCTGCGCGAGCGGTTGCATGTGCAGCGCGACCAGACGGCGGACGCCATCGCCCGGTATTTTCCGCAGGGTACGCGGCTGAACCTGCCGCGCGGCGGGCTGCAGCTGTGGGTGGAGCTGCCGCAGCGGCTGTCGTCGGTGTCGGTGTTCGACGCGGCACTGCGCGAGCACATGCTGGTGGCGCCGGGCGCGCAGTTCTCGAACTCGTCGCGCTTCGACCACTACCTGCGCATCAACTGCGGCTGGCCGTATTCCGATGCGGTCGACGCCGGGCTGCGCCGGCTGGGCGCCATCGTGAGCGAAGGCTGCGGCGTGGCGCCACCGGCCACGGCCGAGCGGCGCAAGGCGACTTCGTCCTCAGTTCAGTCGAGCAGCGCCAGGGCGGCGTAG
PROTEIN sequence
Length: 514
MPERGNIGLMDSLPLYRQLAAHYVDAIHTGSLKQGDKLPSLRSLMRLHDISLSTALQLCRAMESDGWVEARDRSGYFVRRPQRMAIAPMEEPVADVPPDPAQFVSMRERMANFMARGRHTGVKLNFAIARAAPELYPAEALRNSMTRALRQRPELLTTASSQKGHLQFREAVAQRNLRIGMTVAPDEVLVTNGCIEALNLALRAIAKPGDTVAVESPTFYGLLQVLESLGMRALEIPTSPQTGISIEALELAIQTYDDIKAVVVVPHLQNPIGSVMPDAHKQRLVHLCESHGIALVEDDTYSDLVESDTPLRALKSWDRTGNVIYCASLHKVLAPGLRLGWITAGRWHAQVEMLKYAQTRNNEALAQIAAGEFIAGGAYDRHLRRLRERLHVQRDQTADAIARYFPQGTRLNLPRGGLQLWVELPQRLSSVSVFDAALREHMLVAPGAQFSNSSRFDHYLRINCGWPYSDAVDAGLRRLGAIVSEGCGVAPPATAERRKATSSSVQSSSARAA*