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SCNpilot_cont_300_bf_scaffold_84_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2573..4381)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 602.0
  • Bit_score: 1198
  • Evalue 0.0
succinate dehydrogenase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 602.0
  • Bit_score: 1190
  • Evalue 0.0
succinate dehydrogenase flavoprotein subunit n=1 Tax=Variovorax paradoxus RepID=UPI0003707DBD similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 602.0
  • Bit_score: 1206
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGACCTACACAAAAGAAAAAATCACCAAGCGCAAGTTCGACGTCGTGATCGTCGGTGCCGGCGGCTCCGGCATGCGCGCCTCGCTGCAACTCGCACGTGCCGGCCTCAACGTGGCCGTGCTCTCCAAGGTGTTCCCGACCCGTTCGCACACCGTCGCCGCCCAGGGCGGCGTGGGTGCATCGCTCGGCAACATGAGCGAAGACAACTGGCACTACCACTTCTACGACACGATCAAGGGTTCCGACTGGCTCGGCGACCAGGACGCGATCGAGTTCATGTGCCGCGAAGCACCGAAGGTCGTGTACGAGCTCGAGCACTTCGGCATGCCGTTCGACCGCAACCCCGACGGCACCATCTACCAGCGTCCGTTCGGCGGCCACACGGCCAACTACGGCGAAAAGCCCGTGCAGCGCGCCTGCGCCGCGGCCGACCGTACCGGCCACGCGATGCTGCACACGCTCTACCAGAAGAACGTGGAAGCCCGCACCCAGTTCTTCGTCGAATGGATGGCGCTCGACCTCATCCGTGACGAAGAAGGCGACGTGGTCGGCGTGACCGCCCTCGAAATGGAAACCGGCGACCTGCACATCCTGCAGGCCAAGACCGTGCTGCTGGCCACCGGCGGCGCGGGCCGCATCTTCCAGGCCTCGACCAACGCATTCATCAACACCGGCGACGGCCTCGGCATGGCCGCTCGCTCGGGCATTCCGCTGCAGGACATGGAGTTCTGGCAGTTCCACCCGACCGGCGTGGCCGGCGCGGGCGTGCTGCTGACCGAAGGCTGCCGCGGCGAAGGCGCGATCCTGCTGAACAGCAACGGCGAACGCTTCATGGAGCGCTATGCGCCCACGCTGAAGGACCTGGCGCCGCGCGACTTCGTCTCGCGCTCCATGGACCAGGAAATCAAGGAAGGCCGAGGCTGCGGTCCCAACAAGGACTACGTGCTGCTCAAGCTCGACCACCTGGGCGCCGACACCATCCACAAGCGCCTGCCCTCGGTGTACGAAATCGGCGTCAACTTCGCCAACGTCGACATCACCAAGGAACCGATTCCCGTCGTGCCGACCATCCACTACCAGATGGGCGGCATCCCCACCAACATCCACGGCCAGGTCGTGGTGCAGAAGGGCGAGGACAACAGCGCCGTCGTGAACGGCCTCTACGCGGTGGGCGAATGCTCCTGCGTGAGCGTGCACGGCGCCAACCGCCTGGGCACGAACTCGCTGCTCGACCTGCTGGTGTTCGGCCGCGCGGCCGGCAACCACATCGTCGAGTTCGCCGACAAGCTCAAGGAACACAAGCCCCTGCCCAACGATGCGGCCGACCGCACGCTGGAGCGCCTGAACCGCCTCGAAGCCACCACCGGCGGCGAGTACGCGCAGGACGTGGCCGGCGAGATCCGCGCCGTCATGCAGCAGCATGCCGCCGTGTTCCGCAAGCAGGCCTCGATGGACGAAGGCGTGGTCAAGATCGCCGCCGTGCGCGAGCGCGTCAAGGCCATCGGCCTGAAGGACAAGTCGAAGGTGTTCAACACCGCCCGCATCGAAGCGCTGGAAGTCGACAACCTGATCGAAGTGGCGCAGGCCACCATGGTCTCGGCCGCTGCCCGCAAGGAATGCCGCGGCGCCCACACGGTCGAAGACTACGAACGCCCGGCCGACGATCCGGTCGCGCCGCTCGGCCGCGACGACGCCAACTGGATGAAGCACACGCTCTGGTACAGCGACGACAACCGCCTCTCGTACAAGCCGGTCAAGCTGCAGCCCCTGACGGTCGCCTCGGTGCCTCCGAAGGTCCGGACATTCTAA
PROTEIN sequence
Length: 603
MTYTKEKITKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVGASLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDEEGDVVGVTALEMETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQDMEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQEIKEGRGCGPNKDYVLLKLDHLGADTIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQMGGIPTNIHGQVVVQKGEDNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNHIVEFADKLKEHKPLPNDAADRTLERLNRLEATTGGEYAQDVAGEIRAVMQQHAAVFRKQASMDEGVVKIAAVRERVKAIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARKECRGAHTVEDYERPADDPVAPLGRDDANWMKHTLWYSDDNRLSYKPVKLQPLTVASVPPKVRTF*