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SCNpilot_cont_300_bf_scaffold_84_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4768..5214)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Variovorax sp. CF313 RepID=J2TI53_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 148.0
  • Bit_score: 287
  • Evalue 5.90e-75
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EJL78207.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 148.0
  • Bit_score: 287
  • Evalue 8.30e-75
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 148.0
  • Bit_score: 280
  • Evalue 3.90e-73

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGACAGAGCTTGCAAATCCTCCCCGGCCACCGCGCCGCGAATTCCGGAACATCAATGCATTCACCGATCTCACGACCTACCGGCTCCCGCCGGCGGGCATCGTGTCGATCCTGCACCGCGTGAGCGGCGTGATCATGTTCCTGCTGCTGCCGTTCATCATCTGGATGTTCGACACGTCGCTGTCATCTGACTATTCGTTCGCGAAATTCAAGAGCGCCTTCAACGTCGGCATCGGCTTCGCTCCGGGTTGGTTCTTCAAGCTCGTCGCGCTCGCGCTGATCTGGGCCTATCTGCACCACTTCATCGCCGGCCTGCGCCACCTCTGGATGGACGTGAGCCACTCCGCCGTGACCAAGGAATTCGGCCACACCTCCGCCCTCTTCACGCTGGGCGCGAGCATCATCCTCACGCTGGTGCTGGGCGCCAAGCTGTTCGGCCTGTACTGA
PROTEIN sequence
Length: 149
MTELANPPRPPRREFRNINAFTDLTTYRLPPAGIVSILHRVSGVIMFLLLPFIIWMFDTSLSSDYSFAKFKSAFNVGIGFAPGWFFKLVALALIWAYLHHFIAGLRHLWMDVSHSAVTKEFGHTSALFTLGASIILTLVLGAKLFGLY*