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SCNpilot_cont_300_bf_scaffold_84_curated_60

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 57039..57419

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=1 Tax=Variovorax paradoxus RepID=UPI000371D8E1 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 126.0
  • Bit_score: 237
  • Evalue 7.80e-60
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 124.0
  • Bit_score: 235
  • Evalue 3.20e-59
rplS; 50S ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 126.0
  • Bit_score: 229
  • Evalue 6.70e-58

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGAACCTCATCCAGACCCTCGAGCAGGAAGAAATTTCCCGCCTCGGCAAGACCATCCCCGATTTCATGCCCGGTGACACGGTCATCGTCAGCGTGAACGTCGTCGAAGGCACCCGCAAGCGCGTGCAGGCCTACGAAGGCGTCGTGATCGCCAAGCGCAATCGTGGCCTCAACAGCGGCTTCACCGTGCGCAAGATCTCCAGCGGCGAAGGCGTGGAGCGTACGTTCCAGACCTACAGCCCGCTGATCGCCAACATCGAAGTCAAGCGCCGTGGCGACGTTCGCCGCGCCAAGCTGTACTACCTGCGCGACCGCAGCGGCCGTTCGGCACGTATCAAGGAAAAGCTGCCGAGCAAGTCGACGGCTGCGTCGGCCGCTTAA
PROTEIN sequence
Length: 127
MNLIQTLEQEEISRLGKTIPDFMPGDTVIVSVNVVEGTRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYSPLIANIEVKRRGDVRRAKLYYLRDRSGRSARIKEKLPSKSTAASAA*