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SCNpilot_cont_300_bf_scaffold_84_curated_65

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(61528..62325)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 265.0
  • Bit_score: 512
  • Evalue 2.80e-142
ribosome small subunit-dependent GTPase a; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 265.0
  • Bit_score: 495
  • Evalue 8.00e-138
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Variovorax sp. CF313 RepID=J2TFM1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 265.0
  • Bit_score: 512
  • Evalue 2.00e-142

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
GTGGTCGGCGACCGCGTGCACTGGCAGGCCAGCGAAGACGAAGGCACCATCGAGCAGGTGCTGCCGCGCCGCAACCTGTTCTACCGGCAGGACGAGATCCGCACCAAGTCGTTCGCGGCCAATCTCGACCATGTGCTGATCCTGATCGCGGCCGAACCGGAGTTTTCCGAACATCAACTGGCGCGCGCGCTGATCGCGGCGGAGGCCGAGCGCATCCAGCCGATCATCGCGCTCAACAAGAGCGATCTGGTCGAGCCCTTCGAGCGCGCCTGGGCCAAGTTGGCGCCGTACCGCCGCATGCACCACGGCGTGCTGCCGCTGTCGCTTAAGGCCTCGGGCGAAGCTGATTACGCCTCGCTGATGAAGCTGCTGTCGGGCAAGTCGACCCTGGTGCTCGGCCCCTCCGGATCGGGCAAGAGCACGCTGACCAACCTGCTGGTGCCGGGCGCGAGCGTGCTGACCCAGGAGATTTCACAGGCGCTGAACTCGGGCAAGCACACGACCACCAGCACCACCTGGTATTGGATCGACGAGGCCCGCACCACCGGCCTGATCGACTCGCCGGGCTTTCAGGAATTCGGTCTGAACCACATCGCGCCGATGCAACTCGCGGGGCTGATGCCCGACATCGCCGAGCACGCGAACGACTGCAAGTTCTACAACTGCACCCATCTGCACGAGCCCGGCTGCGGCGTGATCGCGAATGTCGCTTCGGCGGACGGCACCGGCGCCATCAGCGCGAGCCGCTACAAGATCTACGGCGAGCTGTTCGCCGAACTGAGCCAGAAGCGGTACTGA
PROTEIN sequence
Length: 266
VVGDRVHWQASEDEGTIEQVLPRRNLFYRQDEIRTKSFAANLDHVLILIAAEPEFSEHQLARALIAAEAERIQPIIALNKSDLVEPFERAWAKLAPYRRMHHGVLPLSLKASGEADYASLMKLLSGKSTLVLGPSGSGKSTLTNLLVPGASVLTQEISQALNSGKHTTTSTTWYWIDEARTTGLIDSPGFQEFGLNHIAPMQLAGLMPDIAEHANDCKFYNCTHLHEPGCGVIANVASADGTGAISASRYKIYGELFAELSQKRY*