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SCNpilot_cont_300_bf_scaffold_84_curated_68

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 64210..64806

Top 3 Functional Annotations

Value Algorithm Source
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 198.0
  • Bit_score: 389
  • Evalue 3.50e-105
exonuclease rnase t and DNA polymerase iii; K13288 oligoribonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 198.0
  • Bit_score: 386
  • Evalue 3.90e-105
oligoribonuclease n=1 Tax=Variovorax paradoxus RepID=UPI00037B37BB similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 198.0
  • Bit_score: 390
  • Evalue 8.70e-106

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCCCGAATCCCTTGACCCGACGCCCCCGGCCGCCGTGCCCACCCTCAAGAAAAGCGACCAGAACCTGGTCTGGCTCGACTGCGAAATGAGCGGCCTCGACCCCGAGAAAGAGCGCCTGCTCGAAATCGCGGTGGTCGTCACCGGCCCCGACCTCACACCCCGCATCGACGGCCCCGTGCTCGTCATCCACCAGAGCGACGTCGTGCTCGACGGCATGGATGCCTGGAACAAGGGCACCCACGGGCGCAGCGGCCTGATCGACAAGGTCAAGGCTTCCACGCTCGACGAAGCCGCGGCCGAGCAGCAATTGCTGGAATTCATCGCCAAATACATCCCGCGCAGCGGTTCGCCCATGTGCGGCAACACCATCGGGCAGGACCGGCGCTTCCTGGTCAAATACATGCCCAAGCTCGAGGCGTATTTCCACTACCGCAACCTCGACGTCAGCACGCTGAAGGAGCTGGCCAAGCGCTGGAAACCGGCGGCCTACAGCAGCTTCAAGAAGCAGCAGGCGCACACGGCCCTGGCCGACGTGCACGAGTCCATCGAGGAACTGGCGCACTACCGCGAAACCTTCCTGCGTTTGGCAGATTGA
PROTEIN sequence
Length: 199
MPESLDPTPPAAVPTLKKSDQNLVWLDCEMSGLDPEKERLLEIAVVVTGPDLTPRIDGPVLVIHQSDVVLDGMDAWNKGTHGRSGLIDKVKASTLDEAAAEQQLLEFIAKYIPRSGSPMCGNTIGQDRRFLVKYMPKLEAYFHYRNLDVSTLKELAKRWKPAAYSSFKKQQAHTALADVHESIEELAHYRETFLRLAD*